fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G37780.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb015466 not found in 320aa AT5G57620.1 not_not 0.406474820 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G37780.1     MGRAPCCDKMAVKKGPWSTEEDAVLKSYIEKHGTGNNWISLPQRIGIKRCGKSCRLRWLN
Sb015466_Sorbi1 MGRAPCCDKATVKKGPWSPEEDAMLKNYIEEHGTGGNWIALPHKIGLKRCGKSCRLRWLN
                ********* :*******.****:**.***:****.***:**::**:*************

AT4G37780.1     YLRPNLKHGGFTDEEDYIICSLYITIGSRWSIIASQLPGRTDNDIKNYWNTRLKKKLLSK
Sb015466_Sorbi1 YLRPNIKHGDFTPEEDSIICSLYISIGSRWSIIAAQLPGRTDNDVKNYWNTKLKKRLLGR
                *****:***.** *** *******:*********:*********:******:***:**.:

AT4G37780.1     QGKAFHQQLNVKFERGTTSSSSSQNQIQIFHDENTKSNQTLYNQVVDPSMRAFAMEEQSM
Sb015466_Sorbi1 R-KDHHRQSAAD---ASTSTSTGENM----------------NDGEPAALSASAMERIQL
                : * .*:*  ..   .:**:*:.:*                 *:   .:: * ***. .:

AT4G37780.1     ---IKNQILEPFSWEPNKVLFDVDYDAAASSYHHHASPSLNSMSST---SSIGTNNSSLQ
Sb015466_Sorbi1 CMQLQNNHPLPLMW-----------------------PGCGSRASTQSNNSFNSNGSSVT
                   ::*:   *: *                       *. .* :**   .*:.:*.**: 

AT4G37780.1     M-----SHYTVNHNDH-------------------------DQPDMFFMDGFENFQAELF
Sb015466_Sorbi1 MAEQGQSSSSLNEQQHHLVMSAQLEGAAGAIDNGLASPSSAENSNMISM------EAEL-
                *     *  ::*.::*                         ::.:*: *      :*** 

AT4G37780.1     DEI---ANNNTVENG-------FDGTEI-LINNNYLDHDISS------------------
Sb015466_Sorbi1 EELLYGADDNPQGNAAAAAAGMVDGGGVQQVDVDWWSYDQQAAGKSPVGCWDFTPETNTV
                :*:   *::*.  *.       .**  :  :: :: .:* .:                  

AT4G37780.1     FIDY-PLYDNE
Sb015466_Sorbi1 FLDYASVYDI-
                *:** .:**
BoxShade v3.31 C (beta, 970507) Output
AT4G37780.1     M G R A P C C D K M A V K K G P W S T E E D A V L K S Y I E K H G T G N N W I S L P Q R I G I K R C G K S C R L R W L N
Sb015466_Sorbi1    M G R A P C C D K A T V K K G P W S P E E D A M L K N Y I E E H G T G G N W I A L P H K I G L K R C G K S C R L R W L N
 
AT4G37780.1     Y L R P N L K H G G F T D E E D Y I I C S L Y I T I G S R W S I I A S Q L P G R T D N D I K N Y W N T R L K K K L L S K
Sb015466_Sorbi1    Y L R P N I K H G D F T P E E D S I I C S L Y I S I G S R W S I I A A Q L P G R T D N D V K N Y W N T K L K K R L L G R
 
AT4G37780.1     Q G K A F H Q Q L N V K F E R G T T S S S S S Q N Q I Q I F H D E N T K S N Q T L Y N Q V V D P S M R A F A M E E Q S M
Sb015466_Sorbi1    R - K D H H R Q S A A D - - - A S T S T S T G E N M - - - - - - - - - - - - - - - - N D G E P A A L S A S A M E R I Q L
 
AT4G37780.1     - - - I K N Q I L E P F S W E P N K V L F D V D Y D A A A S S Y H H H A S P S L N S M S S T - - - S S I G T N N S S L Q
Sb015466_Sorbi1    C M Q L Q N N H P L P L M W - - - - - - - - - - - - - - - - - - - - - - - P G C G S R A S T Q S N N S F N S N G S S V T
 
AT4G37780.1     M - - - - - S H Y T V N H N D H - - - - - - - - - - - - - - - - - - - - - - - - - D Q P D M F F M D G F E N F Q A E L F
Sb015466_Sorbi1    M A E Q G Q S S S S L N E Q Q H H L V M S A Q L E G A A G A I D N G L A S P S S A E N S N M I S M - - - - - - E A E L -
 
AT4G37780.1     D E I - - - A N N N T V E N G - - - - - - - F D G T E I - L I N N N Y L D H D I S S - - - - - - - - - - - - - - - - - -
Sb015466_Sorbi1    E E L L Y G A D D N P Q G N A A A A A A G M V D G G G V Q Q V D V D W W S Y D Q Q A A G K S P V G C W D F T P E T N T V
 
AT4G37780.1     F I D Y - P L Y D N E
Sb015466_Sorbi1    F L D Y A S V Y D I -
 
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