fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G37780.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb020145 not found in 349aa AT5G57620.1 1st_not 0.410071942 II
Sb015466 not found in 320aa AT5G57620.1 not_not 0.406474820 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G37780.1     --------MGRAPCCDKMAVKKGPWSTEEDAVLKSYIEKHGTGNNWISLPQRIGIKRCGK
Sb015466_Sorbi1 --------MGRAPCCDKATVKKGPWSPEEDAMLKNYIEEHGTGGNWIALPHKIGLKRCGK
Sb020145_Sorbi1 ERKTEDYAMGRAPCCDKATVKKGPWSPEEDAKLKSYIEQNGTGGNWIALPQKIGLKRCGK
                        ********* :*******.**** **.***::***.***:**::**:*****

AT4G37780.1     SCRLRWLNYLRPNLKHGGFTDEEDYIICSLYITIGSRWSIIASQLPGRTDNDIKNYWNTR
Sb015466_Sorbi1 SCRLRWLNYLRPNIKHGDFTPEEDSIICSLYISIGSRWSIIAAQLPGRTDNDVKNYWNTK
Sb020145_Sorbi1 SCRLRWLNYLRPNIKHGGFSEEEDRIILSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTR
                *************:***.*: *** ** ****:*********:*********:******:

AT4G37780.1     LKKKLLSKQGKAFHQQLNVKFERGTTSSSSSQNQIQIFHDENTKSN-----------QTL
Sb015466_Sorbi1 LKKRLLGR--RKDHH-----RQSAADASTSTSTGENMNDGEPAALSASAMERIQLCMQLQ
Sb020145_Sorbi1 LKKKLFGKQSRKDQRQHQFMRQQAAAANDGMMKQEAAATGDAAGSSSMAVASYNWHHQAM
                ***:*:.:  :  ::      : .: :. .  .      .: :  .           *  

AT4G37780.1     YNQVVDPSM------RAF--------------AMEEQSMIKNQILEPFSWEPNKVLFDVD
Sb015466_Sorbi1 NNHPL-PLMWPGCGSRASTQSNNSFNSNGSSVTMAEQGQSSSSLNE----QQHHLVMSAQ
Sb020145_Sorbi1 AAMPVQPI--PG--------------------SIMEGHRPGDEVDE----SIRKLLYKLG
                    : *                         :: *     ..: *    . .::: .  

AT4G37780.1     YDAAASSYHH-HASPSLNSMSSTSSI------------------------------GTNN
Sb015466_Sorbi1 LEGAAGAIDNGLASPSSAENSNMISMEAELEELLYGADDNPQGNAAAAAAGMVDGGGVQ-
Sb020145_Sorbi1 GAGPFTALSVPQCVPPMYEGSP-------------GLMPPPSSCPAVDAGTSLDEGGVQG
                  ..  :     . *.  . *                                   *.: 

AT4G37780.1     SSL-------QMSHYTVNHNDHDQPDMFFMDGFENFQAELFDE---------------IA
Sb015466_Sorbi1 ------------------QVDVDW----------------WSYDQQAAGKSPVGCWDFTP
Sb020145_Sorbi1 SSVLPALELDQGFHF--NQVKLDGLESFF--GIGTDQSMRWSE------VSPLIC----P
                                  : . *                 :.                 .

AT4G37780.1     NNNTVENGFDGTEILINNNYLDHDISSFIDYPLYDNE-------
Sb015466_Sorbi1 ETNTV----------------------FLDYASVYDI-------
Sb020145_Sorbi1 NNNVAASTSQG----------------MQQYCLAVDEPGNLGMK
                :.*..                      : :*    :
BoxShade v3.31 C (beta, 970507) Output
AT4G37780.1     - - - - - - - - M G R A P C C D K M A V K K G P W S T E E D A V L K S Y I E K H G T G N N W I S L P Q R I G I K R C G K
Sb015466_Sorbi1    - - - - - - - - M G R A P C C D K A T V K K G P W S P E E D A M L K N Y I E E H G T G G N W I A L P H K I G L K R C G K
Sb020145_Sorbi1    E R K T E D Y A M G R A P C C D K A T V K K G P W S P E E D A K L K S Y I E Q N G T G G N W I A L P Q K I G L K R C G K
 
AT4G37780.1     S C R L R W L N Y L R P N L K H G G F T D E E D Y I I C S L Y I T I G S R W S I I A S Q L P G R T D N D I K N Y W N T R
Sb015466_Sorbi1    S C R L R W L N Y L R P N I K H G D F T P E E D S I I C S L Y I S I G S R W S I I A A Q L P G R T D N D V K N Y W N T K
Sb020145_Sorbi1    S C R L R W L N Y L R P N I K H G G F S E E E D R I I L S L Y I S I G S R W S I I A A Q L P G R T D N D I K N Y W N T R
 
AT4G37780.1     L K K K L L S K Q G K A F H Q Q L N V K F E R G T T S S S S S Q N Q I Q I F H D E N T K S N - - - - - - - - - - - Q T L
Sb015466_Sorbi1    L K K R L L G R - - R K D H H - - - - - R Q S A A D A S T S T S T G E N M N D G E P A A L S A S A M E R I Q L C M Q L Q
Sb020145_Sorbi1    L K K K L F G K Q S R K D Q R Q H Q F M R Q Q A A A A N D G M M K Q E A A A T G D A A G S S S M A V A S Y N W H H Q A M
 
AT4G37780.1     Y N Q V V D P S M - - - - - - R A F - - - - - - - - - - - - - - A M E E Q S M I K N Q I L E P F S W E P N K V L F D V D
Sb015466_Sorbi1    N N H P L - P L M W P G C G S R A S T Q S N N S F N S N G S S V T M A E Q G Q S S S S L N E - - - - Q Q H H L V M S A Q
Sb020145_Sorbi1    A A M P V Q P I - - P G - - - - - - - - - - - - - - - - - - - - S I M E G H R P G D E V D E - - - - S I R K L L Y K L G
 
AT4G37780.1     Y D A A A S S Y H H - H A S P S L N S M S S T S S I - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G T N N
Sb015466_Sorbi1    L E G A A G A I D N G L A S P S S A E N S N M I S M E A E L E E L L Y G A D D N P Q G N A A A A A A G M V D G G G V Q -
Sb020145_Sorbi1    G A G P F T A L S V P Q C V P P M Y E G S P - - - - - - - - - - - - - G L M P P P S S C P A V D A G T S L D E G G V Q G
 
AT4G37780.1     S S L - - - - - - - Q M S H Y T V N H N D H D Q P D M F F M D G F E N F Q A E L F D E - - - - - - - - - - - - - - - I A
Sb015466_Sorbi1    - - - - - - - - - - - - - - - - - - Q V D V D W - - - - - - - - - - - - - - - - W S Y D Q Q A A G K S P V G C W D F T P
Sb020145_Sorbi1    S S V L P A L E L D Q G F H F - - N Q V K L D G L E S F F - - G I G T D Q S M R W S E - - - - - - V S P L I C - - - - P
 
AT4G37780.1     N N N T V E N G F D G T E I L I N N N Y L D H D I S S F I D Y P L Y D N E - - - - - - -
Sb015466_Sorbi1    E T N T V - - - - - - - - - - - - - - - - - - - - - - F L D Y A S V Y D I - - - - - - -
Sb020145_Sorbi1    N N N V A A S T S Q G - - - - - - - - - - - - - - - - M Q Q Y C L A V D E P G N L G M K
 
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