fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G37780.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm001997 not found in 270aa AT3G49690.1 1st_not 0.420863309 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G37780.1     MGRAPCCDKMAVKKGPWSTEEDAVLKSYIEKHGTGNNWISLPQRIGIKRCGKSCRLRWLN
gm001997_Glyma0 MGRAPCCDKANVKKGPWSPEEDAKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN
                *********  *******.**** ******:****.***:***:**:*************

AT4G37780.1     YLRPNLKHGGFTDEEDYIICSLYITIGSRWSIIASQLPGRTDNDIKNYWNTRLKKKLLSK
gm001997_Glyma0 YLRPNIKHGGFSEEEDNIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGK
                *****:*****::*** ******::*********:****************:******.*

AT4G37780.1     QGKAFHQQLNVKFERGTTSSSSSQNQIQIFHDENTKSNQTLYNQVVDPSMRAFAMEEQSM
gm001997_Glyma0 QRK--EQQAQAQARRQQQQPYANACEIPSLQDQ---AFPTMVNQV-------------TV
                * *  .** :.: .*   .. :.  :*  ::*:   :  *: ***             ::

AT4G37780.1     IKNQILEPFSWEPNKVLFDVDYDAAASSYHHHASPSLNSMSSTSSIGTNNSSLQMSHYTV
gm001997_Glyma0 VSNE--------------------------------------------NNSGTY------
                :.*:                                            ***.        

AT4G37780.1     NHNDHDQPDMFFMDGFENFQAELFDEIANN----NTVENGFDGTEILINNNYLDH-----
gm001997_Glyma0 ------QPSNIF-QGFENFPSDFCEPVCVNPQQMEAFNYGMESMDMTMSNGGSTNTTSTE
                      **. :* :***** ::: : :. *    ::.: *::. :: :.*.   :     

AT4G37780.1     -----DISSFIDYPLY-DNE-------------------------
gm001997_Glyma0 STSWGDMSSLVYSPLVSDYERCRQGIPQDHVVAFEECKYFGMQMQ
                     *:**::  **  * *
BoxShade v3.31 C (beta, 970507) Output
AT4G37780.1     M G R A P C C D K M A V K K G P W S T E E D A V L K S Y I E K H G T G N N W I S L P Q R I G I K R C G K S C R L R W L N
gm001997_Glyma0    M G R A P C C D K A N V K K G P W S P E E D A K L K S Y I E Q H G T G G N W I A L P Q K I G L K R C G K S C R L R W L N
 
AT4G37780.1     Y L R P N L K H G G F T D E E D Y I I C S L Y I T I G S R W S I I A S Q L P G R T D N D I K N Y W N T R L K K K L L S K
gm001997_Glyma0    Y L R P N I K H G G F S E E E D N I I C S L Y V S I G S R W S I I A A Q L P G R T D N D I K N Y W N T K L K K K L L G K
 
AT4G37780.1     Q G K A F H Q Q L N V K F E R G T T S S S S S Q N Q I Q I F H D E N T K S N Q T L Y N Q V V D P S M R A F A M E E Q S M
gm001997_Glyma0    Q R K - - E Q Q A Q A Q A R R Q Q Q Q P Y A N A C E I P S L Q D Q - - - A F P T M V N Q V - - - - - - - - - - - - - T V
 
AT4G37780.1     I K N Q I L E P F S W E P N K V L F D V D Y D A A A S S Y H H H A S P S L N S M S S T S S I G T N N S S L Q M S H Y T V
gm001997_Glyma0    V S N E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - N N S G T Y - - - - - -
 
AT4G37780.1     N H N D H D Q P D M F F M D G F E N F Q A E L F D E I A N N - - - - N T V E N G F D G T E I L I N N N Y L D H - - - - -
gm001997_Glyma0    - - - - - - Q P S N I F - Q G F E N F P S D F C E P V C V N P Q Q M E A F N Y G M E S M D M T M S N G G S T N T T S T E
 
AT4G37780.1     - - - - - D I S S F I D Y P L Y - D N E - - - - - - - - - - - - - - - - - - - - - - - - -
gm001997_Glyma0    S T S W G D M S S L V Y S P L V S D Y E R C R Q G I P Q D H V V A F E E C K Y F G M Q M Q
 
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