fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G38620.1 QEKFPDLNLELRISLP at 196/282 in AT4G38620.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt013177 not found in 298aa AT1G22640.1 not_not 0.459965928 III
Pt015624 not found in 301aa AT1G22640.1 not_not 0.454855195 III
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G38620.1     MGRSPCCEKAHTNKGAWTKEEDERLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINY
pt015624_POPTR_ MGRSPCCEKEHTNKGAWTKEEDQRLMDYIRVHGEGCWRSLPKAAGLLRCGKSCRLRWINY
pt013177_POPTR_ MGRSPCCEKAHTNKGAWTKEEDQRLIDYIRVHGEGCWRSLPKAAGLLRCGKSCRLRWINY
                ********* ************:**: **:.*****************************

AT4G38620.1     LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLINRG
pt015624_POPTR_ LRPDLKRGNFTDEEDEIIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLISRG
pt013177_POPTR_ LRPDLKRGNFTEEEDEIIIKLHSLLGNKWSLIAGKLPGRTDNEIKNYWNTHIKRKLVSRG
                ***********:****:*****************:*****************:***:.**

AT4G38620.1     IDPTSHRPIQE--------SSASQDSKPTQLE------------PVTSNTINISFTSAPK
pt015624_POPTR_ IDPHTHRPLNERTTTATIKTTTSATTKATQLDFKNTPPQSLAEISLLKSQLDFKYN----
pt013177_POPTR_ IDPQTHRPLNEKTTTT---TTATSTTKTTQLNFKNTPPQSLAEISILKSQLDSKYNST-K
                *** :***::*        ::::  :*.***:            .: .. :: .:.    

AT4G38620.1     VETFHESI--SF-PGKSEKISM---------LTFKEE---KDECPVQEKFPDLNLELRIS
pt015624_POPTR_ -NNFHSSQYSSFNPKKTETTSVEENNCTSSSMTTDEEQQQQQQKRESHQDQDVNLDLTIG
pt013177_POPTR_ SNDFLSSLYSSFKPKKIETASLEENNCTSCSTTTDEE---QQQKRESHHDQDINLDLTIG
                 : * .*   ** * * *. *:          * .**   :::   ..:  *:**:* *.

AT4G38620.1     LPDDVD-------------RLQGHGKS--------TTPRCFKCSLGMINGMECR-CGRMR
pt015624_POPTR_ LALTQT-----SSANSAESRLQQPVSSCQIFGSVLTRPVCLCWQLDGERRELCRNCQNQ-
pt013177_POPTR_ LAPTTKGESTHTSSNSAESRLQQPVSSRQLFGSVSTGPGCLCWQSVGAGWESCRDCQ---
                *.                 ***   .*        * * *:  .        ** *    

AT4G38620.1     CDVVGGSSKGSDMSNGFDFLGLAKKETTSLLGFRSLEMK
pt015624_POPTR_ ------NQNQSSKSNHSK---------------------
pt013177_POPTR_ --------------NHRYYCWK-----------------
                              *
BoxShade v3.31 C (beta, 970507) Output
AT4G38620.1     M G R S P C C E K A H T N K G A W T K E E D E R L V A Y I K A H G E G C W R S L P K A A G L L R C G K S C R L R W I N Y
pt015624_POPTR_    M G R S P C C E K E H T N K G A W T K E E D Q R L M D Y I R V H G E G C W R S L P K A A G L L R C G K S C R L R W I N Y
pt013177_POPTR_    M G R S P C C E K A H T N K G A W T K E E D Q R L I D Y I R V H G E G C W R S L P K A A G L L R C G K S C R L R W I N Y
 
AT4G38620.1     L R P D L K R G N F T E E E D E L I I K L H S L L G N K W S L I A G R L P G R T D N E I K N Y W N T H I R R K L I N R G
pt015624_POPTR_    L R P D L K R G N F T D E E D E I I I K L H S L L G N K W S L I A G R L P G R T D N E I K N Y W N T H I K R K L I S R G
pt013177_POPTR_    L R P D L K R G N F T E E E D E I I I K L H S L L G N K W S L I A G K L P G R T D N E I K N Y W N T H I K R K L V S R G
 
AT4G38620.1     I D P T S H R P I Q E - - - - - - - - S S A S Q D S K P T Q L E - - - - - - - - - - - - P V T S N T I N I S F T S A P K
pt015624_POPTR_    I D P H T H R P L N E R T T T A T I K T T T S A T T K A T Q L D F K N T P P Q S L A E I S L L K S Q L D F K Y N - - - -
pt013177_POPTR_    I D P Q T H R P L N E K T T T T - - - T T A T S T T K T T Q L N F K N T P P Q S L A E I S I L K S Q L D S K Y N S T - K
 
AT4G38620.1     V E T F H E S I - - S F - P G K S E K I S M - - - - - - - - - L T F K E E - - - K D E C P V Q E K F P D L N L E L R I S
pt015624_POPTR_    - N N F H S S Q Y S S F N P K K T E T T S V E E N N C T S S S M T T D E E Q Q Q Q Q Q K R E S H Q D Q D V N L D L T I G
pt013177_POPTR_    S N D F L S S L Y S S F K P K K I E T A S L E E N N C T S C S T T T D E E - - - Q Q Q K R E S H H D Q D I N L D L T I G
 
AT4G38620.1     L P D D V D - - - - - - - - - - - - - R L Q G H G K S - - - - - - - - T T P R C F K C S L G M I N G M E C R - C G R M R
pt015624_POPTR_    L A L T Q T - - - - - S S A N S A E S R L Q Q P V S S C Q I F G S V L T R P V C L C W Q L D G E R R E L C R N C Q N Q -
pt013177_POPTR_    L A P T T K G E S T H T S S N S A E S R L Q Q P V S S R Q L F G S V S T G P G C L C W Q S V G A G W E S C R D C Q - - -
 
AT4G38620.1     C D V V G G S S K G S D M S N G F D F L G L A K K E T T S L L G F R S L E M K
pt015624_POPTR_    - - - - - - N Q N Q S S K S N H S K - - - - - - - - - - - - - - - - - - - - -
pt013177_POPTR_    - - - - - - - - - - - - - - N H R Y Y C W K - - - - - - - - - - - - - - - - -
 
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