fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G38620.1 QEKFPDLNLELRISLP at 196/282 in AT4G38620.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt018632 QERCPDLNLELRISLP in 186/268 AT4G38620.1 1st_1st 0.582623509 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G38620.1     MGRSPCCEKAHTNKGAWTKEEDERLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINY
pt018632_POPTR_ MGRSPCCEKAHTNKGAWTKEEDDRLIAYIRTHGEGCWRSLPKAAGLLRCGKSCRLRWINY
                **********************:**:***::*****************************

AT4G38620.1     LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLINRG
pt018632_POPTR_ LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLNRG
                ********************************************************:***

AT4G38620.1     IDPTSHRPIQESSASQDSKPTQLEPVTSNTINISFTSAPKVETFHESISFPGKSEKISML
pt018632_POPTR_ IDPATHRPLNE--------PAQ---EASTTISFSTTTSVKEESLSSVKEESNKEKIISAA
                ***::***::*        *:*    :*.**.:* *:: * *:: .  . ..*.: **  

AT4G38620.1     TF--KEEKDECPVQEKFPDLNLELRISLP--DDVDRLQGH--GKSTTPRCFKCSLGMING
pt018632_POPTR_ AFICKEEK--TPVQERCPDLNLELRISLPCQNQPDRHQAFKTGGSTS-LCFACSLGLQNS
                :*  ****   ****: ************  :: ** *..  * **:  ** ****: *.

AT4G38620.1     MECRCGRMRCDVVG--GSSKGSDMSNGFDFLGLAKKETTSLLGFRSLEMK
pt018632_POPTR_ KDCSCSV----IVGTIGSSSSAGSKTGYDFLGM----KSGVLDYRGLEMK
                 :* *.     :**  ***..:. ..*:****:    .:.:*.:*.****
BoxShade v3.31 C (beta, 970507) Output
AT4G38620.1     M G R S P C C E K A H T N K G A W T K E E D E R L V A Y I K A H G E G C W R S L P K A A G L L R C G K S C R L R W I N Y
pt018632_POPTR_    M G R S P C C E K A H T N K G A W T K E E D D R L I A Y I R T H G E G C W R S L P K A A G L L R C G K S C R L R W I N Y
 
AT4G38620.1     L R P D L K R G N F T E E E D E L I I K L H S L L G N K W S L I A G R L P G R T D N E I K N Y W N T H I R R K L I N R G
pt018632_POPTR_    L R P D L K R G N F T E E E D E L I I K L H S L L G N K W S L I A G R L P G R T D N E I K N Y W N T H I R R K L L N R G
 
AT4G38620.1     I D P T S H R P I Q E S S A S Q D S K P T Q L E P V T S N T I N I S F T S A P K V E T F H E S I S F P G K S E K I S M L
pt018632_POPTR_    I D P A T H R P L N E - - - - - - - - P A Q - - - E A S T T I S F S T T T S V K E E S L S S V K E E S N K E K I I S A A
 
AT4G38620.1     T F - - K E E K D E C P V Q E K F P D L N L E L R I S L P - - D D V D R L Q G H - - G K S T T P R C F K C S L G M I N G
pt018632_POPTR_    A F I C K E E K - - T P V Q E R C P D L N L E L R I S L P C Q N Q P D R H Q A F K T G G S T S - L C F A C S L G L Q N S
 
AT4G38620.1     M E C R C G R M R C D V V G - - G S S K G S D M S N G F D F L G L A K K E T T S L L G F R S L E M K
pt018632_POPTR_    K D C S C S V - - - - I V G T I G S S S S A G S K T G Y D F L G M - - - - K S G V L D Y R G L E M K
 
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