fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G38620.1 QEKFPDLNLELRISLP at 196/282 in AT4G38620.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os034636 PLKCPDLNLDLCISLP in 189/251 AT4G38620.1 1st_1st 0.519591141 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G38620.1     MGRSPCCEKAHTNKGAWTKEEDERLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINY
Os034636_Os09t0 MGRSPCCEKAHTNKGAWTKEEDDRLIAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINY
                **********************:**:**********************************

AT4G38620.1     LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLINRG
Os034636_Os09t0 LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRG
                ********************************************************:.**

AT4G38620.1     IDPTSHRPIQESSASQDSKPTQLEPVTSNTINISFTSAPKVETFHESISF-----PGKSE
Os034636_Os09t0 IDPVTHRPINDSASN---------------ITISFEAAAAAARDDKAAVFRREDHPHQPK
                ***.:****::*::.               *.*** :*. .   .::  *     * :.:

AT4G38620.1     KISMLTFKEEKDEC-------PVQEKFPDLNLELRISLPDDVDRLQGHG-KSTTPRCFKC
Os034636_Os09t0 AV---TVAQEQQAAADWGHGKPL--KCPDLNLDLCISLPSQEEPMMMKPVKRETGVCFSC
                 :   *. :*:: .       *:  * *****:* ****.: : :  :  *  *  **.*

AT4G38620.1     SLGMINGMECRCGRMRCDVVGGSSKGSDMSNGFDFLGLAKKETTSLLGFRSLEMK
Os034636_Os09t0 SLGLPKSTDCKCS--------------------SFLGL----RTAMLDFRSLEMK
                ***: :. :*:*.                    .****     *::*.*******
BoxShade v3.31 C (beta, 970507) Output
AT4G38620.1     M G R S P C C E K A H T N K G A W T K E E D E R L V A Y I K A H G E G C W R S L P K A A G L L R C G K S C R L R W I N Y
Os034636_Os09t0    M G R S P C C E K A H T N K G A W T K E E D D R L I A Y I K A H G E G C W R S L P K A A G L L R C G K S C R L R W I N Y
 
AT4G38620.1     L R P D L K R G N F T E E E D E L I I K L H S L L G N K W S L I A G R L P G R T D N E I K N Y W N T H I R R K L I N R G
Os034636_Os09t0    L R P D L K R G N F T E E E D E L I I K L H S L L G N K W S L I A G R L P G R T D N E I K N Y W N T H I R R K L L S R G
 
AT4G38620.1     I D P T S H R P I Q E S S A S Q D S K P T Q L E P V T S N T I N I S F T S A P K V E T F H E S I S F - - - - - P G K S E
Os034636_Os09t0    I D P V T H R P I N D S A S N - - - - - - - - - - - - - - - I T I S F E A A A A A A R D D K A A V F R R E D H P H Q P K
 
AT4G38620.1     K I S M L T F K E E K D E C - - - - - - - P V Q E K F P D L N L E L R I S L P D D V D R L Q G H G - K S T T P R C F K C
Os034636_Os09t0    A V - - - T V A Q E Q Q A A A D W G H G K P L - - K C P D L N L D L C I S L P S Q E E P M M M K P V K R E T G V C F S C
 
AT4G38620.1     S L G M I N G M E C R C G R M R C D V V G G S S K G S D M S N G F D F L G L A K K E T T S L L G F R S L E M K
Os034636_Os09t0    S L G L P K S T D C K C S - - - - - - - - - - - - - - - - - - - - S F L G L - - - - R T A M L D F R S L E M K
 
0