fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G38620.1 QEKFPDLNLELRISLP at 196/282 in AT4G38620.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb016715 VVGGIDLNLSLSPPTS in 196/215 AT4G38620.1 not_1st 0.449744463 II
Sb009095 APRCPDLNLDLDLSVG in 194/269 AT4G38620.1 not_1st 0.449744463 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G38620.1     MGRSPCCEKAHTNKGAWTKEEDERLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINY
Sb016715_Sorbi1 MGRSPCCEKAHTNKGAWTKEEDQRLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINY
Sb009095_Sorbi1 MGRSPCCEKAHTNKGAWTKEEDQRLIAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWMNY
                **********************:**:*******************************:**

AT4G38620.1     LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLINRG
Sb016715_Sorbi1 LRPDLKRGNFTQEEDELIIKLHQILGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLIARG
Sb009095_Sorbi1 LRPDLKRGNFTDDDDEIIIKLHALLGNKWSLIAGQLPGRTDNEIKNYWNTHIKRKLLSRG
                ***********:::**:***** :**********:*****************:***: **

AT4G38620.1     IDPTSHRPIQESSASQDSKPTQLEPVTSNTINISFTSAPKVETFH---ESISFPGKSEKI
Sb016715_Sorbi1 IDPRTHQPASAGAVAP-------APGAAASAA-----APSSHRQHGDDKAAAVVRSSGCS
Sb009095_Sorbi1 IDPQTHRPLSGGAAAG-------SGLTTSSTAGFPAQAPAPTRPA---RPVIIIPPNVMF
                *** :*:* . .:.:           :: :       **         ..  .   .   

AT4G38620.1     SMLTFKEEKDEC-------PVQEKF--PDLNLELRISLPDDVDRLQGHGKSTTPR-----
Sb016715_Sorbi1 SRDS-SGDDDSTSGSSV--PHQHQLVVGGIDLNLSLSPPTSQPSSPAAAN----------
Sb009095_Sorbi1 ARPAPSEDGHSSSGGSTDAPRCPDL---NLDLDLSVGPPCSPPKTPAAAVTTPTSQQQEM
                :  : . : ..        *   .:   .::*:* :. * .     . .           

AT4G38620.1     -----CFKCSLGMINGMECRCGRMRCDVVGGSSKGSDMSNGFDFLGLAKKETTSLLGFRS
Sb016715_Sorbi1 ------------------------------------------------------------
Sb009095_Sorbi1 QRATICLCYHLGVRSGDACSC------------KTAASPAGFRFL-------------RP
                                                                            

AT4G38620.1     LEMK---
Sb016715_Sorbi1 -------
Sb009095_Sorbi1 LEEGQYI
BoxShade v3.31 C (beta, 970507) Output
AT4G38620.1     M G R S P C C E K A H T N K G A W T K E E D E R L V A Y I K A H G E G C W R S L P K A A G L L R C G K S C R L R W I N Y
Sb016715_Sorbi1    M G R S P C C E K A H T N K G A W T K E E D Q R L V A Y I K A H G E G C W R S L P K A A G L L R C G K S C R L R W I N Y
Sb009095_Sorbi1    M G R S P C C E K A H T N K G A W T K E E D Q R L I A Y I K A H G E G C W R S L P K A A G L L R C G K S C R L R W M N Y
 
AT4G38620.1     L R P D L K R G N F T E E E D E L I I K L H S L L G N K W S L I A G R L P G R T D N E I K N Y W N T H I R R K L I N R G
Sb016715_Sorbi1    L R P D L K R G N F T Q E E D E L I I K L H Q I L G N K W S L I A G R L P G R T D N E I K N Y W N T H I K R K L I A R G
Sb009095_Sorbi1    L R P D L K R G N F T D D D D E I I I K L H A L L G N K W S L I A G Q L P G R T D N E I K N Y W N T H I K R K L L S R G
 
AT4G38620.1     I D P T S H R P I Q E S S A S Q D S K P T Q L E P V T S N T I N I S F T S A P K V E T F H - - - E S I S F P G K S E K I
Sb016715_Sorbi1    I D P R T H Q P A S A G A V A P - - - - - - - A P G A A A S A A - - - - - A P S S H R Q H G D D K A A A V V R S S G C S
Sb009095_Sorbi1    I D P Q T H R P L S G G A A A G - - - - - - - S G L T T S S T A G F P A Q A P A P T R P A - - - R P V I I I P P N V M F
 
AT4G38620.1     S M L T F K E E K D E C - - - - - - - P V Q E K F - - P D L N L E L R I S L P D D V D R L Q G H G K S T T P R - - - - -
Sb016715_Sorbi1    S R D S - S G D D D S T S G S S V - - P H Q H Q L V V G G I D L N L S L S P P T S Q P S S P A A A N - - - - - - - - - -
Sb009095_Sorbi1    A R P A P S E D G H S S S G G S T D A P R C P D L - - - N L D L D L S V G P P C S P P K T P A A A V T T P T S Q Q Q E M
 
AT4G38620.1     - - - - - C F K C S L G M I N G M E C R C G R M R C D V V G G S S K G S D M S N G F D F L G L A K K E T T S L L G F R S
Sb016715_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb009095_Sorbi1    Q R A T I C L C Y H L G V R S G D A C S C - - - - - - - - - - - - K T A A S P A G F R F L - - - - - - - - - - - - - R P
 
AT4G38620.1     L E M K - - -
Sb016715_Sorbi1    - - - - - - -
Sb009095_Sorbi1    L E E G Q Y I
 
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