fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G38620.1 QEKFPDLNLELRISLP at 196/282 in AT4G38620.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb031046 VPRCPDLNLDLCISPP in 216/452 AT4G34990.1 not_not 0.475298126 III
Sb018705 not found in 288aa AT4G09460.1 not_not 0.437819420 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G38620.1     -------------MGRSPCCEKAHT----NKGAWT-----------------KEEDERLV
Sb031046_Sorbi1 -----LPYPNPTSQ------EPNQT---------------------------KEKNSAAG
Sb018705_Sorbi1 EDPRGRAAPRRQQQGRAP--EPGQVLAVDRRHEWWSGFFQLGRGSHGEVAVLREGAHEQG
                                    *  :.                           :*      

AT4G38620.1     AYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL--RPDLKRGNFTEEEDELI------
Sb031046_Sorbi1 HFDRSYG------------------HGRLI-------------HSLHLEASEVEHAGPE-
Sb018705_Sorbi1 RVDQGGGR--------AAGGVHPGARGRVLALAAQGGGPAALRQELQAAVDELPPPGPQA
                   :. *                    *:               .:    .*:       

AT4G38620.1     IKLHSLLG---------NKWSLIA---------GR-------------------------
Sb031046_Sorbi1 -----------------PQEAVVAVAAAAAAPGGSFLDAQAAAEAEAAAMAGLQHLPLDD
Sb018705_Sorbi1 RQLHRRRGRAHHPPAQPPRQQVVSDRRAAAGPDGQ-RDQELLEHAHQAQAPGPRHRPAD-
                                  :  :::         *                          

AT4G38620.1     -------------LPGRTDNEIKNYWNT--HI---RRKLINR---------------GID
Sb031046_Sorbi1 DGGLEVQLLVFLLLARRADAEIEVEVGAPGHLNDGRRHRLDRLMLWRLRCDGGVGFVGLE
Sb018705_Sorbi1 --------------APRARSQSRRRHGS-------RRRR---------------------
                              . *:  : .   .:       **:                      

AT4G38620.1     PTS----HRPIQESSASQ--DSKPTQLEPVTSNTINISFTSAPKVETFHESISFPGKSEK
Sb031046_Sorbi1 RDGGDGAGAGVGDGAVRDGVDAPAKQLPPDVRVPVVLDLVVRPP----------------
Sb018705_Sorbi1 -------GAPPGGGA-------------------------AAPP----------------
                             .:                           *                 

AT4G38620.1     ISMLTFKEEK-DECP-VQEKFPDLN------------LELRISL--PDDVDRLQGHGK--
Sb031046_Sorbi1 ------REPRGDERPLVAEEAVQLDDEVVLVGGEVAALEVGAEVVDPAEAAALAAA----
Sb018705_Sorbi1 ------RGRR--RRP----------------GG-------------PGQAPRREAGARGV
                      :  :  . *                               * :.    .     

AT4G38620.1     --------------------------STTPRCFKCSLGMINGMECRCGRMRCDVVGG---
Sb031046_Sorbi1 ---------HQSGRLGQR--------PPAPFAVR--------ADVRH-QAVVLLLGPRAL
Sb018705_Sorbi1 VIRRRRQQQHRQQRRRQRRGATVPRPQPQPRPVRGLAAA--GGGCRHAHLAVPVLPP---
                                           . *  .:           *  :    ::     

AT4G38620.1     -------------------------SSKGSDMSNGFDFLGLAKKETTSLLGFRSLEMK
Sb031046_Sorbi1 VRVRLLAARRPPHRPASCLAFRFRFGYRFAVWSGGRRLRRAGRG-ASSAIGLEN----
Sb018705_Sorbi1 ---------RPPRR-------------------GGVRLRG------------------
                                                 .*  :
BoxShade v3.31 C (beta, 970507) Output
AT4G38620.1     - - - - - - - - - - - - - M G R S P C C E K A H T - - - - N K G A W T - - - - - - - - - - - - - - - - - K E E D E R L V
Sb031046_Sorbi1    - - - - - L P Y P N P T S Q - - - - - - E P N Q T - - - - - - - - - - - - - - - - - - - - - - - - - - - K E K N S A A G
Sb018705_Sorbi1    E D P R G R A A P R R Q Q Q G R A P - - E P G Q V L A V D R R H E W W S G F F Q L G R G S H G E V A V L R E G A H E Q G
 
AT4G38620.1     A Y I K A H G E G C W R S L P K A A G L L R C G K S C R L R W I N Y L - - R P D L K R G N F T E E E D E L I - - - - - -
Sb031046_Sorbi1    H F D R S Y G - - - - - - - - - - - - - - - - - - H G R L I - - - - - - - - - - - - - H S L H L E A S E V E H A G P E -
Sb018705_Sorbi1    R V D Q G G G R - - - - - - - - A A G G V H P G A R G R V L A L A A Q G G G P A A L R Q E L Q A A V D E L P P P G P Q A
 
AT4G38620.1     I K L H S L L G - - - - - - - - - N K W S L I A - - - - - - - - - G R - - - - - - - - - - - - - - - - - - - - - - - - -
Sb031046_Sorbi1    - - - - - - - - - - - - - - - - - P Q E A V V A V A A A A A A P G G S F L D A Q A A A E A E A A A M A G L Q H L P L D D
Sb018705_Sorbi1    R Q L H R R R G R A H H P P A Q P P R Q Q V V S D R R A A A G P D G Q - R D Q E L L E H A H Q A Q A P G P R H R P A D -
 
AT4G38620.1     - - - - - - - - - - - - - L P G R T D N E I K N Y W N T - - H I - - - R R K L I N R - - - - - - - - - - - - - - - G I D
Sb031046_Sorbi1    D G G L E V Q L L V F L L L A R R A D A E I E V E V G A P G H L N D G R R H R L D R L M L W R L R C D G G V G F V G L E
Sb018705_Sorbi1    - - - - - - - - - - - - - - A P R A R S Q S R R R H G S - - - - - - - R R R R - - - - - - - - - - - - - - - - - - - - -
 
AT4G38620.1     P T S - - - - H R P I Q E S S A S Q - - D S K P T Q L E P V T S N T I N I S F T S A P K V E T F H E S I S F P G K S E K
Sb031046_Sorbi1    R D G G D G A G A G V G D G A V R D G V D A P A K Q L P P D V R V P V V L D L V V R P P - - - - - - - - - - - - - - - -
Sb018705_Sorbi1    - - - - - - - G A P P G G G A - - - - - - - - - - - - - - - - - - - - - - - - - A A P P - - - - - - - - - - - - - - - -
 
AT4G38620.1     I S M L T F K E E K - D E C P - V Q E K F P D L N - - - - - - - - - - - - L E L R I S L - - P D D V D R L Q G H G K - -
Sb031046_Sorbi1    - - - - - - R E P R G D E R P L V A E E A V Q L D D E V V L V G G E V A A L E V G A E V V D P A E A A A L A A A - - - -
Sb018705_Sorbi1    - - - - - - R G R R - - R R P - - - - - - - - - - - - - - - - G G - - - - - - - - - - - - - P G Q A P R R E A G A R G V
 
AT4G38620.1     - - - - - - - - - - - - - - - - - - - - - - - - - - S T T P R C F K C S L G M I N G M E C R C G R M R C D V V G G - - -
Sb031046_Sorbi1    - - - - - - - - - H Q S G R L G Q R - - - - - - - - P P A P F A V R - - - - - - - - A D V R H - Q A V V L L L G P R A L
Sb018705_Sorbi1    V I R R R R Q Q Q H R Q Q R R R Q R R G A T V P R P Q P Q P R P V R G L A A A - - G G G C R H A H L A V P V L P P - - -
 
AT4G38620.1     - - - - - - - - - - - - - - - - - - - - - - - - - S S K G S D M S N G F D F L G L A K K E T T S L L G F R S L E M K
Sb031046_Sorbi1    V R V R L L A A R R P P H R P A S C L A F R F R F G Y R F A V W S G G R R L R R A G R G - A S S A I G L E N - - - -
Sb018705_Sorbi1    - - - - - - - - - R P P R R - - - - - - - - - - - - - - - - - - - G G V R L R G - - - - - - - - - - - - - - - - - -
 
0