fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G38620.1 QEKFPDLNLELRISLP at 196/282 in AT4G38620.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm030520 LERCPDLNLELTISPP in 170/246 AT4G34990.1 1st_not 0.533219761 II
Gm032581 LERCPDLNLELTISPP in 173/253 AT4G34990.1 not_not 0.526405451 III
Gm013657 HERCPDLNLELTISPP in 157/235 AT4G34990.1 not_not 0.507666098 III
Gm013658 HERCPDLNLELTISPP in 150/228 AT4G34990.1 not_not 0.470187393 III
Gm015390 SFPHHQLNLDLSIGLP in 203/301 AT4G38620.1 not_1st 0.454855195 II
Gm008427 LERCPDLNLELTISPP in 140/210 AT4G34990.1 not_not 0.451448040 III
Gm010386 SVPHHQLNLDLSIGLP in 210/302 AT4G38620.1 not_1st 0.448040885 II
Gm008428 LERCPDLNLELTISPP in 133/203 AT4G34990.1 not_not 0.415672913 III
Gm005016 not found in 220aa AT4G38620.1 not_1st 0.412265758 II

Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G38620.1     MGRSPCCEKAHTNKGAWTKEEDERLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINY
gm008427_Glyma0 MGRSPCCEKAHTNKGAWTKEEDHRLISYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY
gm030520_Glyma1 MGRSPCCEKAHTNKGAWTKEEDDRLISYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY
gm010386_Glyma0 MGRSPCCEKEHTNKGAWTKEEDERLINYIKLHGEGCWRSLPKAAGLLRCGKSCRLRWINY
gm013658_Glyma0 MGRSPCCEKAHTNKGAWTKEEDHRLISYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY
gm015390_Glyma0 MGRSPCCEKEHTNKGAWTKEEDERLINYIKLHGEGCWRSLPKAAGLLRCGKSCRLRWINY
gm005016_Glyma0 -MRKPCCDKENINKGAWSKQEDQKLIDYIQVHGEGCWRSIPKAAGLHRCGKSCRMRWLNY
gm013657_Glyma0 MGRSPCCEKAHTNKGAWTKEEDHRLISYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY
gm032581_Glyma1 MGRSPCCEKAHTNKGAWTKEEDDRLISYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY
gm008428_Glyma0 MGRSPCCEKAHTNKGAWTKEEDHRLISYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY
                  *.***:* : *****:*:**.:*: **: ********:****** *******:**:**

AT4G38620.1     LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLINRG
gm008427_Glyma0 LRPDLKRGNFSLEEDQLIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRG
gm030520_Glyma1 LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLNRG
gm010386_Glyma0 LRPDLKRGNFTEEEDELIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYSRG
gm013658_Glyma0 LRPDLKRGNFSLEEDQLIIKLHSLLGNK-------LPGRTDNEIKNYWNTHIRRKLLSRG
gm015390_Glyma0 LRPDLKRGNFTEEEDELIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYSRG
gm005016_Glyma0 LRPGIKRGIFAEDEEDLIIKLHALLGNRWSLIAGRLPGRTDNEVKNYWNSHIRRKLIKMG
gm013657_Glyma0 LRPDLKRGNFSLEEDQLIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRG
gm032581_Glyma1 LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLNRG
gm008428_Glyma0 LRPDLKRGNFSLEEDQLIIKLHSLLGNK-------LPGRTDNEIKNYWNTHIRRKLLSRG
                ***.:*** *: :*::***:**:****:       ********:*****:**:*** . *

AT4G38620.1     IDPTSHRPIQESSASQDSKPTQLEPVTSNTINISFTSAPKVETFHESI-----------S
gm008427_Glyma0 IDPATHRPLNDDKVL---------------------------------------------
gm030520_Glyma1 IDPATHRPLNEAATA--------ATV---TTNISFGKQEQQETSSSNG-----------S
gm010386_Glyma0 IDPQTHRPLN-ASAT-------PATTATATAVPSANSSKKINNNNNNIDNDINNNNNGFQ
gm013658_Glyma0 IDPATHRPLNDSSHQE------PAAVS--------APPKHQESFH---------------
gm015390_Glyma0 IDPQTHRPLNAASAT-------PATTVTATAVPSSNSKKKIKNN--------NNNNNGFQ
gm005016_Glyma0 IDPNSHKPHQ----------SFPRPHVSSADHQGASTSESINNNKVPF----------FN
gm013657_Glyma0 IDPATHRPLNDSSHQE------PAAVS--------APPKHQESFH---------------
gm032581_Glyma1 IDPATHRPLNEAASA--------ATVTTATTNISFGKQQEQETSSSNG-----------S
gm008428_Glyma0 IDPATHRPLNDDKVL---------------------------------------------
                *** :*:* :                                                  

AT4G38620.1     FPGKSE----KISM-LTFKEEKDE---CPVQEKFP--DLNLELRISLPDDVD--------
gm008427_Glyma0 -------------------------------ERCP--DLNLELTISPPRQPQ--------
gm030520_Glyma1 VVKGS------------------------ILERCP--DLNLELTISPPRQQQ--------
gm010386_Glyma0 LVSNSAYANTKIGTNLVAAEDSNSSSGVTTEESVPHHQLNLDLSIGLPSQPQ-GSSLNPE
gm013658_Glyma0 ------------------------------HERCP--DLNLELTISPPHHPQ--------
gm015390_Glyma0 LVNNSAYANTKIGTDMIAAEDSNSSSGVTTEESFPHHQLNLDLSIGLPSQPQVSSSLNPE
gm005016_Glyma0 SRGSAATDHHKIS--FTKEETSIISS--------P--PLNLDLTISLPSPVE--------
gm013657_Glyma0 ------------------------------HERCP--DLNLELTISPPHHPQ--------
gm032581_Glyma1 VVKGS------------------------ILERCP--DLNLELTISPPR-QQ--------
gm008428_Glyma0 -------------------------------ERCP--DLNLELTISPPRQPQ--------
                                                  *   ***:* *. *   :        

AT4G38620.1     ----RLQGH------------GKST---TPRCFKCSLGMINGME-CRCGRMR--CDVVGG
gm008427_Glyma0 ----SDQHH------------LKPVGRNSNLCFACSLGLQNSKDHCSCAL---------N
gm030520_Glyma1 ----QTQ---------------------KNLCFVCSLGLHNSKD-CSCNVSN--AVTVNN
gm010386_Glyma0 KLKPEPQEHDDQKPQVLYKWYG-NITSQQGVCLCYNLGLQSNQT-CYCKTMGT-A----T
gm013658_Glyma0 ----PDHPH------------LKTLVTNSNLCFPCSLGLHNSKD-CSCAL---------H
gm015390_Glyma0 KLKPEPQEHDDQKPQVLYQLYGKNITGQQGVCLCYNLGLQSNQA-CYCKTMGT-STTTVT
gm005016_Glyma0 --ENKNSDHESAK--------------------TCDVDIDLN---C--------------
gm013657_Glyma0 ----PDHPH------------LKTLVTNSNLCFPCSLGLHNSKD-CSCAL---------H
gm032581_Glyma1 ----QPQ---------------------KNLCFVCSLGLNNSKD-CSCNVANTVTVTVSN
gm008428_Glyma0 ----SDQHH------------LKPVGRNSNLCFACSLGLQNSKDHCSCAL---------N
                                                   .:.:  .   *              

AT4G38620.1     SSKGS---DMSNGFDFLGLAKKETTSLLGFRSLEMK
gm008427_Glyma0 TANA------ASGHDFLAL---KTSV------LEMK
gm030520_Glyma1 TTPSS---AAAAAYDFLGM---KTSGVWDCTRLEMK
gm010386_Glyma0 TTTATD----SNLYRF-------------YRPMNI-
gm013658_Glyma0 TSTAN---ATATGYDFLAL---KTTVVLDYRTLHMK
gm015390_Glyma0 TTTATD----RNLYRF-------------YRPMNI-
gm005016_Glyma0 ------------------------------------
gm013657_Glyma0 TSTAN---ATATGYDFLAL---KTTVVLDYRTLHMK
gm032581_Glyma1 TTPSSAAAAAAAAYDFLGM---KTNGVWDCTRLEMK
gm008428_Glyma0 TANA------ASGHDFLAL---KTSV------LEMK
                                                    


BoxShade v3.31 C (beta, 970507) Output
AT4G38620.1     M G R S P C C E K A H T N K G A W T K E E D E R L V A Y I K A H G E G C W R S L P K A A G L L R C G K S C R L R W I N Y
gm008427_Glyma0    M G R S P C C E K A H T N K G A W T K E E D H R L I S Y I R A H G E G C W R S L P K A A G L L R C G K S C R L R W I N Y
gm030520_Glyma1    M G R S P C C E K A H T N K G A W T K E E D D R L I S Y I R A H G E G C W R S L P K A A G L L R C G K S C R L R W I N Y
gm010386_Glyma0    M G R S P C C E K E H T N K G A W T K E E D E R L I N Y I K L H G E G C W R S L P K A A G L L R C G K S C R L R W I N Y
gm013658_Glyma0    M G R S P C C E K A H T N K G A W T K E E D H R L I S Y I R A H G E G C W R S L P K A A G L L R C G K S C R L R W I N Y
gm015390_Glyma0    M G R S P C C E K E H T N K G A W T K E E D E R L I N Y I K L H G E G C W R S L P K A A G L L R C G K S C R L R W I N Y
gm005016_Glyma0    - M R K P C C D K E N I N K G A W S K Q E D Q K L I D Y I Q V H G E G C W R S I P K A A G L H R C G K S C R M R W L N Y
gm013657_Glyma0    M G R S P C C E K A H T N K G A W T K E E D H R L I S Y I R A H G E G C W R S L P K A A G L L R C G K S C R L R W I N Y
gm032581_Glyma1    M G R S P C C E K A H T N K G A W T K E E D D R L I S Y I R A H G E G C W R S L P K A A G L L R C G K S C R L R W I N Y
gm008428_Glyma0    M G R S P C C E K A H T N K G A W T K E E D H R L I S Y I R A H G E G C W R S L P K A A G L L R C G K S C R L R W I N Y
 
AT4G38620.1     L R P D L K R G N F T E E E D E L I I K L H S L L G N K W S L I A G R L P G R T D N E I K N Y W N T H I R R K L I N R G
gm008427_Glyma0    L R P D L K R G N F S L E E D Q L I I K L H S L L G N K W S L I A G R L P G R T D N E I K N Y W N T H I R R K L L S R G
gm030520_Glyma1    L R P D L K R G N F T E E E D E L I I K L H S L L G N K W S L I A G R L P G R T D N E I K N Y W N T H I R R K L L N R G
gm010386_Glyma0    L R P D L K R G N F T E E E D E L I I N L H S L L G N K W S L I A A R L P G R T D N E I K N Y W N T H I K R K L Y S R G
gm013658_Glyma0    L R P D L K R G N F S L E E D Q L I I K L H S L L G N K - - - - - - - L P G R T D N E I K N Y W N T H I R R K L L S R G
gm015390_Glyma0    L R P D L K R G N F T E E E D E L I I N L H S L L G N K W S L I A A R L P G R T D N E I K N Y W N T H I K R K L Y S R G
gm005016_Glyma0    L R P G I K R G I F A E D E E D L I I K L H A L L G N R W S L I A G R L P G R T D N E V K N Y W N S H I R R K L I K M G
gm013657_Glyma0    L R P D L K R G N F S L E E D Q L I I K L H S L L G N K W S L I A G R L P G R T D N E I K N Y W N T H I R R K L L S R G
gm032581_Glyma1    L R P D L K R G N F T E E E D E L I I K L H S L L G N K W S L I A G R L P G R T D N E I K N Y W N T H I R R K L L N R G
gm008428_Glyma0    L R P D L K R G N F S L E E D Q L I I K L H S L L G N K - - - - - - - L P G R T D N E I K N Y W N T H I R R K L L S R G
 
AT4G38620.1     I D P T S H R P I Q E S S A S Q D S K P T Q L E P V T S N T I N I S F T S A P K V E T F H E S I - - - - - - - - - - - S
gm008427_Glyma0    I D P A T H R P L N D D K V L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm030520_Glyma1    I D P A T H R P L N E A A T A - - - - - - - - A T V - - - T T N I S F G K Q E Q Q E T S S S N G - - - - - - - - - - - S
gm010386_Glyma0    I D P Q T H R P L N - A S A T - - - - - - - P A T T A T A T A V P S A N S S K K I N N N N N N I D N D I N N N N N G F Q
gm013658_Glyma0    I D P A T H R P L N D S S H Q E - - - - - - P A A V S - - - - - - - - A P P K H Q E S F H - - - - - - - - - - - - - - -
gm015390_Glyma0    I D P Q T H R P L N A A S A T - - - - - - - P A T T V T A T A V P S S N S K K K I K N N - - - - - - - - N N N N N G F Q
gm005016_Glyma0    I D P N S H K P H Q - - - - - - - - - - S F P R P H V S S A D H Q G A S T S E S I N N N K V P F - - - - - - - - - - F N
gm013657_Glyma0    I D P A T H R P L N D S S H Q E - - - - - - P A A V S - - - - - - - - A P P K H Q E S F H - - - - - - - - - - - - - - -
gm032581_Glyma1    I D P A T H R P L N E A A S A - - - - - - - - A T V T T A T T N I S F G K Q Q E Q E T S S S N G - - - - - - - - - - - S
gm008428_Glyma0    I D P A T H R P L N D D K V L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT4G38620.1     F P G K S E - - - - K I S M - L T F K E E K D E - - - C P V Q E K F P - - D L N L E L R I S L P D D V D - - - - - - - -
gm008427_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - E R C P - - D L N L E L T I S P P R Q P Q - - - - - - - -
gm030520_Glyma1    V V K G S - - - - - - - - - - - - - - - - - - - - - - - - I L E R C P - - D L N L E L T I S P P R Q Q Q - - - - - - - -
gm010386_Glyma0    L V S N S A Y A N T K I G T N L V A A E D S N S S S G V T T E E S V P H H Q L N L D L S I G L P S Q P Q - G S S L N P E
gm013658_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - H E R C P - - D L N L E L T I S P P H H P Q - - - - - - - -
gm015390_Glyma0    L V N N S A Y A N T K I G T D M I A A E D S N S S S G V T T E E S F P H H Q L N L D L S I G L P S Q P Q V S S S L N P E
gm005016_Glyma0    S R G S A A T D H H K I S - - F T K E E T S I I S S - - - - - - - - P - - P L N L D L T I S L P S P V E - - - - - - - -
gm013657_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - H E R C P - - D L N L E L T I S P P H H P Q - - - - - - - -
gm032581_Glyma1    V V K G S - - - - - - - - - - - - - - - - - - - - - - - - I L E R C P - - D L N L E L T I S P P R - Q Q - - - - - - - -
gm008428_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - E R C P - - D L N L E L T I S P P R Q P Q - - - - - - - -
 
AT4G38620.1     - - - - R L Q G H - - - - - - - - - - - - G K S T - - - T P R C F K C S L G M I N G M E - C R C G R M R - - C D V V G G
gm008427_Glyma0    - - - - S D Q H H - - - - - - - - - - - - L K P V G R N S N L C F A C S L G L Q N S K D H C S C A L - - - - - - - - - N
gm030520_Glyma1    - - - - Q T Q - - - - - - - - - - - - - - - - - - - - - K N L C F V C S L G L H N S K D - C S C N V S N - - A V T V N N
gm010386_Glyma0    K L K P E P Q E H D D Q K P Q V L Y K W Y G - N I T S Q Q G V C L C Y N L G L Q S N Q T - C Y C K T M G T - A - - - - T
gm013658_Glyma0    - - - - P D H P H - - - - - - - - - - - - L K T L V T N S N L C F P C S L G L H N S K D - C S C A L - - - - - - - - - H
gm015390_Glyma0    K L K P E P Q E H D D Q K P Q V L Y Q L Y G K N I T G Q Q G V C L C Y N L G L Q S N Q A - C Y C K T M G T - S T T T V T
gm005016_Glyma0    - - E N K N S D H E S A K - - - - - - - - - - - - - - - - - - - - T C D V D I D L N - - - C - - - - - - - - - - - - - -
gm013657_Glyma0    - - - - P D H P H - - - - - - - - - - - - L K T L V T N S N L C F P C S L G L H N S K D - C S C A L - - - - - - - - - H
gm032581_Glyma1    - - - - Q P Q - - - - - - - - - - - - - - - - - - - - - K N L C F V C S L G L N N S K D - C S C N V A N T V T V T V S N
gm008428_Glyma0    - - - - S D Q H H - - - - - - - - - - - - L K P V G R N S N L C F A C S L G L Q N S K D H C S C A L - - - - - - - - - N
 
AT4G38620.1     S S K G S - - - D M S N G F D F L G L A K K E T T S L L G F R S L E M K
gm008427_Glyma0    T A N A - - - - - - A S G H D F L A L - - - K T S V - - - - - - L E M K
gm030520_Glyma1    T T P S S - - - A A A A A Y D F L G M - - - K T S G V W D C T R L E M K
gm010386_Glyma0    T T T A T D - - - - S N L Y R F - - - - - - - - - - - - - Y R P M N I -
gm013658_Glyma0    T S T A N - - - A T A T G Y D F L A L - - - K T T V V L D Y R T L H M K
gm015390_Glyma0    T T T A T D - - - - R N L Y R F - - - - - - - - - - - - - Y R P M N I -
gm005016_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm013657_Glyma0    T S T A N - - - A T A T G Y D F L A L - - - K T T V V L D Y R T L H M K
gm032581_Glyma1    T T P S S A A A A A A A A Y D F L G M - - - K T N G V W D C T R L E M K
gm008428_Glyma0    T A N A - - - - - - A S G H D F L A L - - - K T S V - - - - - - L E M K
 
0