Input
| Putative repression domain
|
|
AT4G38900.2 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt021917 |
not found in 600aa |
AT4G38900.3 |
1st_not |
0.519480519 |
II |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT4G38900.2 MGDTEKCNSDMIQRLHSSFGTTSSS---IPKNP--------ISQLDLNPNFIRSSA-PQF
pt021917_POPTR_ MGDTEDANSEMIQRLQSSFGTTQSSSATMSKQPFSLINQLDVSQLNLNQTQLRARHFANF
*****..**:*****:******.** :.*:* :***:** . :*: .:*
AT4G38900.2 SKPFS-DSGKRIGVPPSHPNLIPPTSPFSQIPTTR----QPGSHNFNPGGANHSRSMSQP
pt021917_POPTR_ YQNFSGDSNKRVGIPPSHPNQIPPISPYSQIPVSRPANQQMSTQNFSM-GPTHSRSLSQP
: ** **.**:*:****** *** **:****.:* * .::**. *..****:***
AT4G38900.2 NSFFSFDSLPPLSPSPFRDH-----------DVSMEDRDSGVFNSNHS-LPPSPFTRCNS
pt021917_POPTR_ SSFFCLDSLPPLSPAPFRDSSSPTVSDPISTDVSMEDKDG----SSHSLLPPSPFNRGNA
.***.:********:**** ******:*. *.** ******.* *:
AT4G38900.2 TSSSSLRVGESLPPRKSHRRSNSDIPSGFN----SMPLIPPR---PLERSFSGGECADWS
pt021917_POPTR_ P-----RVGESLPPRKAHRRSNSDIPFG-NVLQCSPPLIPLRGSGGLERSLSGRENPAMA
. **********:********* * * * **** * ****:** * . :
AT4G38900.2 KSNPFVKKESSCER------EGVGEREA---MDDLFSAYMNLENIDVLNSSEADDSKNGN
pt021917_POPTR_ KPAQLVKKE--WERGGESIAEGTGERKSEGDVDDLFSAYMNLDNIDALNSSGTDE-KNGN
*. :**** ** **.***:: :**********:***.**** :*: ****
AT4G38900.2 ENRDDMESSRASGTKTNG---SDTEGESSSVNESANN----NMNSSGEKRESVKRRAAGG
pt021917_POPTR_ ENREDLD-SRASGTKTNGGDSSDNEAE-SSVNESGGSVPRGGFSSSTEKREGIK-RSAGG
***:*:: ********** **.*.* ******... .:.** ****.:* *:***
AT4G38900.2 DIAPTTRHYRSVSVDSCFMEKLSFGDESLKPPPSPGSMSRKVSPTNSVDGNSGAAFSIEF
pt021917_POPTR_ DIAPTSRHYRSVSMDS-FMGKLNFGDESPKLPPSPGTRPGQLSPTNSMDGN---AFSLEF
*****:*******:** ** **.***** * *****: . ::*****:*** ***:**
AT4G38900.2 NNGEFTAAEMKKIMANDKLAEMAMSDPKRVKRILANRQSAARSKERKMRYIVELEHKVQT
pt021917_POPTR_ GNGEFSGAELKKIMANEKLAEIASTDPKRAKRILANRQSAARSKERKMRYISELEHKVQT
.****:.**:******:****:* :****.********************* ********
AT4G38900.2 LQTEATTLSAQLTLLQRDMMGLTNQNNELKFRLQAMEQQARLRDALNEALNGEVQRLKLA
pt021917_POPTR_ LQTEATTLSAQLTLLQRDSVGLTSQNNELKFRLQAMEQQAQLRDALNEALNGEVRRLKIA
****************** :***.****************:*************:***:*
AT4G38900.2 IGESSQNESERSK-----MQSLNAEMF------QQLNISQLRQQPQ-----------QMQ
pt021917_POPTR_ TAEQG-GDSDPSKGLVQQQLSVNPQMFMQQPRPSQLNRQQLQQQQQPSASQINMHQLQQQ
.*.. .:*: ** *:*.:** .*** .**:** * * *
AT4G38900.2 QQSHQ-QNHQNGTMATKSESNE
pt021917_POPTR_ QQSSQPQPQQNGSTTLKSDSNQ
*** * * :***: : **:**:
BoxShade v3.31 C (beta, 970507) Output
AT4G38900.2 |
M |
G |
D |
T |
E |
K |
C |
N |
S |
D |
M |
I |
Q |
R |
L |
H |
S |
S |
F |
G |
T |
T |
S |
S |
S |
- |
- |
- |
I |
P |
K |
N |
P |
- |
- |
- |
- |
- |
- |
- |
- |
I |
S |
Q |
L |
D |
L |
N |
P |
N |
F |
I |
R |
S |
S |
A |
- |
P |
Q |
F |
pt021917_POPTR_ |
M |
G |
D |
T |
E |
D |
A |
N |
S |
E |
M |
I |
Q |
R |
L |
Q |
S |
S |
F |
G |
T |
T |
Q |
S |
S |
S |
A |
T |
M |
S |
K |
Q |
P |
F |
S |
L |
I |
N |
Q |
L |
D |
V |
S |
Q |
L |
N |
L |
N |
Q |
T |
Q |
L |
R |
A |
R |
H |
F |
A |
N |
F |
|
AT4G38900.2 |
S |
K |
P |
F |
S |
- |
D |
S |
G |
K |
R |
I |
G |
V |
P |
P |
S |
H |
P |
N |
L |
I |
P |
P |
T |
S |
P |
F |
S |
Q |
I |
P |
T |
T |
R |
- |
- |
- |
- |
Q |
P |
G |
S |
H |
N |
F |
N |
P |
G |
G |
A |
N |
H |
S |
R |
S |
M |
S |
Q |
P |
pt021917_POPTR_ |
Y |
Q |
N |
F |
S |
G |
D |
S |
N |
K |
R |
V |
G |
I |
P |
P |
S |
H |
P |
N |
Q |
I |
P |
P |
I |
S |
P |
Y |
S |
Q |
I |
P |
V |
S |
R |
P |
A |
N |
Q |
Q |
M |
S |
T |
Q |
N |
F |
S |
M |
- |
G |
P |
T |
H |
S |
R |
S |
L |
S |
Q |
P |
|
AT4G38900.2 |
N |
S |
F |
F |
S |
F |
D |
S |
L |
P |
P |
L |
S |
P |
S |
P |
F |
R |
D |
H |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
D |
V |
S |
M |
E |
D |
R |
D |
S |
G |
V |
F |
N |
S |
N |
H |
S |
- |
L |
P |
P |
S |
P |
F |
T |
R |
C |
N |
S |
pt021917_POPTR_ |
S |
S |
F |
F |
C |
L |
D |
S |
L |
P |
P |
L |
S |
P |
A |
P |
F |
R |
D |
S |
S |
S |
P |
T |
V |
S |
D |
P |
I |
S |
T |
D |
V |
S |
M |
E |
D |
K |
D |
G |
- |
- |
- |
- |
S |
S |
H |
S |
L |
L |
P |
P |
S |
P |
F |
N |
R |
G |
N |
A |
|
AT4G38900.2 |
T |
S |
S |
S |
S |
L |
R |
V |
G |
E |
S |
L |
P |
P |
R |
K |
S |
H |
R |
R |
S |
N |
S |
D |
I |
P |
S |
G |
F |
N |
- |
- |
- |
- |
S |
M |
P |
L |
I |
P |
P |
R |
- |
- |
- |
P |
L |
E |
R |
S |
F |
S |
G |
G |
E |
C |
A |
D |
W |
S |
pt021917_POPTR_ |
P |
- |
- |
- |
- |
- |
R |
V |
G |
E |
S |
L |
P |
P |
R |
K |
A |
H |
R |
R |
S |
N |
S |
D |
I |
P |
F |
G |
- |
N |
V |
L |
Q |
C |
S |
P |
P |
L |
I |
P |
L |
R |
G |
S |
G |
G |
L |
E |
R |
S |
L |
S |
G |
R |
E |
N |
P |
A |
M |
A |
|
AT4G38900.2 |
K |
S |
N |
P |
F |
V |
K |
K |
E |
S |
S |
C |
E |
R |
- |
- |
- |
- |
- |
- |
E |
G |
V |
G |
E |
R |
E |
A |
- |
- |
- |
M |
D |
D |
L |
F |
S |
A |
Y |
M |
N |
L |
E |
N |
I |
D |
V |
L |
N |
S |
S |
E |
A |
D |
D |
S |
K |
N |
G |
N |
pt021917_POPTR_ |
K |
P |
A |
Q |
L |
V |
K |
K |
E |
- |
- |
W |
E |
R |
G |
G |
E |
S |
I |
A |
E |
G |
T |
G |
E |
R |
K |
S |
E |
G |
D |
V |
D |
D |
L |
F |
S |
A |
Y |
M |
N |
L |
D |
N |
I |
D |
A |
L |
N |
S |
S |
G |
T |
D |
E |
- |
K |
N |
G |
N |
|
AT4G38900.2 |
E |
N |
R |
D |
D |
M |
E |
S |
S |
R |
A |
S |
G |
T |
K |
T |
N |
G |
- |
- |
- |
S |
D |
T |
E |
G |
E |
S |
S |
S |
V |
N |
E |
S |
A |
N |
N |
- |
- |
- |
- |
N |
M |
N |
S |
S |
G |
E |
K |
R |
E |
S |
V |
K |
R |
R |
A |
A |
G |
G |
pt021917_POPTR_ |
E |
N |
R |
E |
D |
L |
D |
- |
S |
R |
A |
S |
G |
T |
K |
T |
N |
G |
G |
D |
S |
S |
D |
N |
E |
A |
E |
- |
S |
S |
V |
N |
E |
S |
G |
G |
S |
V |
P |
R |
G |
G |
F |
S |
S |
S |
T |
E |
K |
R |
E |
G |
I |
K |
- |
R |
S |
A |
G |
G |
|
AT4G38900.2 |
D |
I |
A |
P |
T |
T |
R |
H |
Y |
R |
S |
V |
S |
V |
D |
S |
C |
F |
M |
E |
K |
L |
S |
F |
G |
D |
E |
S |
L |
K |
P |
P |
P |
S |
P |
G |
S |
M |
S |
R |
K |
V |
S |
P |
T |
N |
S |
V |
D |
G |
N |
S |
G |
A |
A |
F |
S |
I |
E |
F |
pt021917_POPTR_ |
D |
I |
A |
P |
T |
S |
R |
H |
Y |
R |
S |
V |
S |
M |
D |
S |
- |
F |
M |
G |
K |
L |
N |
F |
G |
D |
E |
S |
P |
K |
L |
P |
P |
S |
P |
G |
T |
R |
P |
G |
Q |
L |
S |
P |
T |
N |
S |
M |
D |
G |
N |
- |
- |
- |
A |
F |
S |
L |
E |
F |
|
AT4G38900.2 |
N |
N |
G |
E |
F |
T |
A |
A |
E |
M |
K |
K |
I |
M |
A |
N |
D |
K |
L |
A |
E |
M |
A |
M |
S |
D |
P |
K |
R |
V |
K |
R |
I |
L |
A |
N |
R |
Q |
S |
A |
A |
R |
S |
K |
E |
R |
K |
M |
R |
Y |
I |
V |
E |
L |
E |
H |
K |
V |
Q |
T |
pt021917_POPTR_ |
G |
N |
G |
E |
F |
S |
G |
A |
E |
L |
K |
K |
I |
M |
A |
N |
E |
K |
L |
A |
E |
I |
A |
S |
T |
D |
P |
K |
R |
A |
K |
R |
I |
L |
A |
N |
R |
Q |
S |
A |
A |
R |
S |
K |
E |
R |
K |
M |
R |
Y |
I |
S |
E |
L |
E |
H |
K |
V |
Q |
T |
|
AT4G38900.2 |
L |
Q |
T |
E |
A |
T |
T |
L |
S |
A |
Q |
L |
T |
L |
L |
Q |
R |
D |
M |
M |
G |
L |
T |
N |
Q |
N |
N |
E |
L |
K |
F |
R |
L |
Q |
A |
M |
E |
Q |
Q |
A |
R |
L |
R |
D |
A |
L |
N |
E |
A |
L |
N |
G |
E |
V |
Q |
R |
L |
K |
L |
A |
pt021917_POPTR_ |
L |
Q |
T |
E |
A |
T |
T |
L |
S |
A |
Q |
L |
T |
L |
L |
Q |
R |
D |
S |
V |
G |
L |
T |
S |
Q |
N |
N |
E |
L |
K |
F |
R |
L |
Q |
A |
M |
E |
Q |
Q |
A |
Q |
L |
R |
D |
A |
L |
N |
E |
A |
L |
N |
G |
E |
V |
R |
R |
L |
K |
I |
A |
|
AT4G38900.2 |
I |
G |
E |
S |
S |
Q |
N |
E |
S |
E |
R |
S |
K |
- |
- |
- |
- |
- |
M |
Q |
S |
L |
N |
A |
E |
M |
F |
- |
- |
- |
- |
- |
- |
Q |
Q |
L |
N |
I |
S |
Q |
L |
R |
Q |
Q |
P |
Q |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
Q |
M |
Q |
pt021917_POPTR_ |
T |
A |
E |
Q |
G |
- |
G |
D |
S |
D |
P |
S |
K |
G |
L |
V |
Q |
Q |
Q |
L |
S |
V |
N |
P |
Q |
M |
F |
M |
Q |
Q |
P |
R |
P |
S |
Q |
L |
N |
R |
Q |
Q |
L |
Q |
Q |
Q |
Q |
Q |
P |
S |
A |
S |
Q |
I |
N |
M |
H |
Q |
L |
Q |
Q |
Q |
|
AT4G38900.2 |
Q |
Q |
S |
H |
Q |
- |
Q |
N |
H |
Q |
N |
G |
T |
M |
A |
T |
K |
S |
E |
S |
N |
E |
pt021917_POPTR_ |
Q |
Q |
S |
S |
Q |
P |
Q |
P |
Q |
Q |
N |
G |
S |
T |
T |
L |
K |
S |
D |
S |
N |
Q |
|
|