fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G38960.1 IDDEMIDLNANPQRVHE at 138/183 in AT4G38960.1
IDDEMIDLNANPQRVHE at 105/150 in AT4G38960.2
IDDEMIDLNANPQRVHE at 181/226 in AT4G38960.3
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os034540 IDSKMIDLNMRPVRTHG in 166/211 AT4G38960.1 1st_1st 0.598130841 Ia
Sb006271 IDSKMIDLNMRPVRTHG in 166/211 AT4G38960.1 1st_1st 0.591900311 Ia
Gm030569 MDKKLIDLNTRPLRLNG in 166/212 AT4G38960.1 1st_1st 0.626168224 Ia
Pt022229 MDNNLIDLNARPQRIHG in 166/203 AT4G38960.1 1st_1st 0.676012461 Ia
Pp004666 NQPRMIDLNSRPKRLQS in 201/220 AT4G38960.1 1st_1st 0.436137071 Ia
Get sequence file
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G38960.1     MRILCDACENAAAIIFCAADEAALCRPCDEKVHMCNKLASRHVRVGLAEPSNAPCCDICE
Sb006271_Sorbi1 MRTICDVCESAPAVLFCAADEAALCRSCDEKVHMCNKLASRHVRVGLADPNKLARCDICE
pp004666_Pp1s20 MRTLCDVCEAAPARLFCAADEAALCLKCDEKVHSCNKLANRHVRLELAESRAVPRCDICE
gm030569_Glyma1 MRTLCDVCESAAAILFCAADEAALCSACDHKIHMCNKLASRHVRVGLADPTDVPRCDICE
pt022229_POPTR_ MRTICDVCESAAAILFCAADEAALCRSCDEKVHLCNKLASRHVRVGLADPSAVPQCDICE
Os034540_Os09t0 MRTICDVCESAPAVLFCVADEAALCRSCDEKVHMCNKLARRHVRVGLADPNKVQRCDICE
                ** :**.** *.* :**.*******  **.*:* ***** ****: **:.     *****

AT4G38960.1     NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHGRFLLLRQRIEFPGDKPKEN---------
Sb006271_Sorbi1 NSPAFFYCEIDGTSLCLSCDMTVHVGGKRTHGRYLLLRQRVEFPGDKPGHMDDVPMETVP
pp004666_Pp1s20 NAPAFFFCGVDGTSLCLQCDMDVHVGGKKAHERYLMMGQRVELPSRKLRFEDNVDTEKLP
gm030569_Glyma1 NAPAFFYCEIDGSSLCLQCDMIVHVGGKRTHGRYLLLRQRAQFPGDKPAQMEE--LELQP
pt022229_POPTR_ NAPAFFYCEIDGSSLCLQCDMIVHVGGKRTHGRYLLLRQRVEFPGDKPGRMEE--QGQQP
Os034540_Os09t0 NAPAFFYCEIDGTSLCLSCDMTVHVGGKRTHGRYLLLRQRVEFPGDKPGHMDD-----VA
                *:****:* :**:****.*** ******::* *:*:: ** ::*. *             

AT4G38960.1     ------------------NTRDNLQNQRV--------------S----TNGNGEANGK--
Sb006271_Sorbi1 METKDPENQRDQKKAP----KEQMANHHN--------------GDHPACDGNCDDQGN--
pp004666_Pp1s20 AEPS--NAPTDKNGVL----PDHHHHHHYHHHHHHHHHEDEVRAGLPAPKQSCDRDASNA
gm030569_Glyma1 MDQN--ESRRDESQSLKLKTRDSQQNHSV--------------SPFPRQENNIDGHGK--
pt022229_POPTR_ LDHN--ETRRDQNQPLKLTARENKQNHRA--------------SPVPMVENNTDSDGK--
Os034540_Os09t0 MQQKDPENRTDQKKAPHSVTKEQMANHHN-------------VSDDPASDGNCDDQGN--
                                     :   ::                .     . . : ...  

AT4G38960.1     --------------IDD-------EMIDLNANPQRVHEPSSNNNG--IDVNNENNHEPAG
Sb006271_Sorbi1 --------------IDS-------KMIDLNMRPVRTHGQGSNSQTQGVDL-SVNNHDSPG
pp004666_Pp1s20 PAIAITAGDEESLLIDGCIHQNQPRMIDLNSRPKRLQSQAS-------------------
gm030569_Glyma1 --------------MDK-------KLIDLNTRPLRLNGSAPNNQEQCMDILRGNNHESAS
pt022229_POPTR_ --------------MDN-------NLIDLNARPQRIHGQNSTNQE---------NHESSS
Os034540_Os09t0 --------------IDS-------KMIDLNMRPVRTHGQGSNSQTQGVDV-SVNNHDSPG
                              :*        .:**** .* * :   .                   

AT4G38960.1     LVPVGPFKRESEK
Sb006271_Sorbi1 VVPTSNSERDASK
pp004666_Pp1s20 -VPDKG-------
gm030569_Glyma1 VPPVESFKQESEK
pt022229_POPTR_ AVPVGSFKREPQK
Os034540_Os09t0 VVPTCNFEREANK
                  *
BoxShade v3.31 C (beta, 970507) Output
AT4G38960.1     M R I L C D A C E N A A A I I F C A A D E A A L C R P C D E K V H M C N K L A S R H V R V G L A E P S N A P C C D I C E
Sb006271_Sorbi1    M R T I C D V C E S A P A V L F C A A D E A A L C R S C D E K V H M C N K L A S R H V R V G L A D P N K L A R C D I C E
pp004666_Pp1s20    M R T L C D V C E A A P A R L F C A A D E A A L C L K C D E K V H S C N K L A N R H V R L E L A E S R A V P R C D I C E
gm030569_Glyma1    M R T L C D V C E S A A A I L F C A A D E A A L C S A C D H K I H M C N K L A S R H V R V G L A D P T D V P R C D I C E
pt022229_POPTR_    M R T I C D V C E S A A A I L F C A A D E A A L C R S C D E K V H L C N K L A S R H V R V G L A D P S A V P Q C D I C E
Os034540_Os09t0    M R T I C D V C E S A P A V L F C V A D E A A L C R S C D E K V H M C N K L A R R H V R V G L A D P N K V Q R C D I C E
 
AT4G38960.1     N A P A F F Y C E I D G S S L C L Q C D M V V H V G G K R T H G R F L L L R Q R I E F P G D K P K E N - - - - - - - - -
Sb006271_Sorbi1    N S P A F F Y C E I D G T S L C L S C D M T V H V G G K R T H G R Y L L L R Q R V E F P G D K P G H M D D V P M E T V P
pp004666_Pp1s20    N A P A F F F C G V D G T S L C L Q C D M D V H V G G K K A H E R Y L M M G Q R V E L P S R K L R F E D N V D T E K L P
gm030569_Glyma1    N A P A F F Y C E I D G S S L C L Q C D M I V H V G G K R T H G R Y L L L R Q R A Q F P G D K P A Q M E E - - L E L Q P
pt022229_POPTR_    N A P A F F Y C E I D G S S L C L Q C D M I V H V G G K R T H G R Y L L L R Q R V E F P G D K P G R M E E - - Q G Q Q P
Os034540_Os09t0    N A P A F F Y C E I D G T S L C L S C D M T V H V G G K R T H G R Y L L L R Q R V E F P G D K P G H M D D - - - - - V A
 
AT4G38960.1     - - - - - - - - - - - - - - - - - - N T R D N L Q N Q R V - - - - - - - - - - - - - - S - - - - T N G N G E A N G K - -
Sb006271_Sorbi1    M E T K D P E N Q R D Q K K A P - - - - K E Q M A N H H N - - - - - - - - - - - - - - G D H P A C D G N C D D Q G N - -
pp004666_Pp1s20    A E P S - - N A P T D K N G V L - - - - P D H H H H H H Y H H H H H H H H H E D E V R A G L P A P K Q S C D R D A S N A
gm030569_Glyma1    M D Q N - - E S R R D E S Q S L K L K T R D S Q Q N H S V - - - - - - - - - - - - - - S P F P R Q E N N I D G H G K - -
pt022229_POPTR_    L D H N - - E T R R D Q N Q P L K L T A R E N K Q N H R A - - - - - - - - - - - - - - S P V P M V E N N T D S D G K - -
Os034540_Os09t0    M Q Q K D P E N R T D Q K K A P H S V T K E Q M A N H H N - - - - - - - - - - - - - V S D D P A S D G N C D D Q G N - -
 
AT4G38960.1     - - - - - - - - - - - - - - I D D - - - - - - - E M I D L N A N P Q R V H E P S S N N N G - - I D V N N E N N H E P A G
Sb006271_Sorbi1    - - - - - - - - - - - - - - I D S - - - - - - - K M I D L N M R P V R T H G Q G S N S Q T Q G V D L - S V N N H D S P G
pp004666_Pp1s20    P A I A I T A G D E E S L L I D G C I H Q N Q P R M I D L N S R P K R L Q S Q A S - - - - - - - - - - - - - - - - - - -
gm030569_Glyma1    - - - - - - - - - - - - - - M D K - - - - - - - K L I D L N T R P L R L N G S A P N N Q E Q C M D I L R G N N H E S A S
pt022229_POPTR_    - - - - - - - - - - - - - - M D N - - - - - - - N L I D L N A R P Q R I H G Q N S T N Q E - - - - - - - - - N H E S S S
Os034540_Os09t0    - - - - - - - - - - - - - - I D S - - - - - - - K M I D L N M R P V R T H G Q G S N S Q T Q G V D V - S V N N H D S P G
 
AT4G38960.1     L V P V G P F K R E S E K
Sb006271_Sorbi1    V V P T S N S E R D A S K
pp004666_Pp1s20    - V P D K G - - - - - - -
gm030569_Glyma1    V P P V E S F K Q E S E K
pt022229_POPTR_    A V P V G S F K R E P Q K
Os034540_Os09t0    V V P T C N F E R E A N K
 
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