Input
| Putative repression domain
|
|
AT4G38960.1 |
IDDEMIDLNANPQRVHE at 138/183 in AT4G38960.1 |
|
IDDEMIDLNANPQRVHE at 105/150 in AT4G38960.2 |
IDDEMIDLNANPQRVHE at 181/226 in AT4G38960.3 |
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pp004666 |
NQPRMIDLNSRPKRLQS in 201/220 |
AT4G38960.1 |
1st_1st |
0.436137071 |
Ia |
Pp035016 |
NQSRMIDLNSRPKRLQN in 202/221 |
AT4G38960.1 |
not_1st |
0.436137071 |
II |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)
AT4G38960.1 MRILCDACENAAAIIFCAADEAALCRPCDEKVHMCNKLASRHVRVGLAEPSNAPCCDICE
pp035016_Pp1s31 MRTLCDVCEAAPARLFCAADEAALCLKCDEKVHSCNKLAYRHVRLELAESRPVPRCDICE
pp004666_Pp1s20 MRTLCDVCEAAPARLFCAADEAALCLKCDEKVHSCNKLANRHVRLELAESRAVPRCDICE
** ***.** *.* :********** ****** ***** ****: ***. .* *****
AT4G38960.1 NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHGRFLLLRQRIEFPGDK-------------
pp035016_Pp1s31 NAPAFFFCGVDGTSLCLQCDMDVHVGGKKAHERYLMMRQRVELPSRKLRFEDTVDTEKPT
pp004666_Pp1s20 NAPAFFFCGVDGTSLCLQCDMDVHVGGKKAHERYLMMGQRVELPSRKLRFEDNVDTEKLP
******:* :**:******** ******::* *:*:: **:*:*. *
AT4G38960.1 ------PKENNT-------------------------------------RDNLQNQRVST
pp035016_Pp1s31 AEPNSVPADKNGTLLPDQHHHHHYHHHHHHHHHEDELRAGLPASKPSCDRDNSNAPAIAI
pp004666_Pp1s20 AEPSNAPTDKNG-VLPDHHHHHHYHHHHHHHHHEDEVRAGLPAPKQSCDRDASNAPAIAI
* ::* ** : ::
AT4G38960.1 NGNGEANGKIDD-------EMIDLNANPQRVHEPSSNNNGIDVNNENNHEPAGLVPVGPF
pp035016_Pp1s31 AAGDEESLLLDDCLVQNQSRMIDLNSRPKRLQNQAS------------------VP----
pp004666_Pp1s20 TAGDEESLLIDGCIHQNQPRMIDLNSRPKRLQSQAS------------------VP----
...* . :*. .*****:.*:*::. :* **
AT4G38960.1 KRESEK-
pp035016_Pp1s31 ----DKG
pp004666_Pp1s20 ----DKG
:*
BoxShade v3.31 C (beta, 970507) Output
AT4G38960.1 |
M |
R |
I |
L |
C |
D |
A |
C |
E |
N |
A |
A |
A |
I |
I |
F |
C |
A |
A |
D |
E |
A |
A |
L |
C |
R |
P |
C |
D |
E |
K |
V |
H |
M |
C |
N |
K |
L |
A |
S |
R |
H |
V |
R |
V |
G |
L |
A |
E |
P |
S |
N |
A |
P |
C |
C |
D |
I |
C |
E |
pp035016_Pp1s31 |
M |
R |
T |
L |
C |
D |
V |
C |
E |
A |
A |
P |
A |
R |
L |
F |
C |
A |
A |
D |
E |
A |
A |
L |
C |
L |
K |
C |
D |
E |
K |
V |
H |
S |
C |
N |
K |
L |
A |
Y |
R |
H |
V |
R |
L |
E |
L |
A |
E |
S |
R |
P |
V |
P |
R |
C |
D |
I |
C |
E |
pp004666_Pp1s20 |
M |
R |
T |
L |
C |
D |
V |
C |
E |
A |
A |
P |
A |
R |
L |
F |
C |
A |
A |
D |
E |
A |
A |
L |
C |
L |
K |
C |
D |
E |
K |
V |
H |
S |
C |
N |
K |
L |
A |
N |
R |
H |
V |
R |
L |
E |
L |
A |
E |
S |
R |
A |
V |
P |
R |
C |
D |
I |
C |
E |
|
AT4G38960.1 |
N |
A |
P |
A |
F |
F |
Y |
C |
E |
I |
D |
G |
S |
S |
L |
C |
L |
Q |
C |
D |
M |
V |
V |
H |
V |
G |
G |
K |
R |
T |
H |
G |
R |
F |
L |
L |
L |
R |
Q |
R |
I |
E |
F |
P |
G |
D |
K |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
pp035016_Pp1s31 |
N |
A |
P |
A |
F |
F |
F |
C |
G |
V |
D |
G |
T |
S |
L |
C |
L |
Q |
C |
D |
M |
D |
V |
H |
V |
G |
G |
K |
K |
A |
H |
E |
R |
Y |
L |
M |
M |
R |
Q |
R |
V |
E |
L |
P |
S |
R |
K |
L |
R |
F |
E |
D |
T |
V |
D |
T |
E |
K |
P |
T |
pp004666_Pp1s20 |
N |
A |
P |
A |
F |
F |
F |
C |
G |
V |
D |
G |
T |
S |
L |
C |
L |
Q |
C |
D |
M |
D |
V |
H |
V |
G |
G |
K |
K |
A |
H |
E |
R |
Y |
L |
M |
M |
G |
Q |
R |
V |
E |
L |
P |
S |
R |
K |
L |
R |
F |
E |
D |
N |
V |
D |
T |
E |
K |
L |
P |
|
AT4G38960.1 |
- |
- |
- |
- |
- |
- |
P |
K |
E |
N |
N |
T |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
R |
D |
N |
L |
Q |
N |
Q |
R |
V |
S |
T |
pp035016_Pp1s31 |
A |
E |
P |
N |
S |
V |
P |
A |
D |
K |
N |
G |
T |
L |
L |
P |
D |
Q |
H |
H |
H |
H |
H |
Y |
H |
H |
H |
H |
H |
H |
H |
H |
H |
E |
D |
E |
L |
R |
A |
G |
L |
P |
A |
S |
K |
P |
S |
C |
D |
R |
D |
N |
S |
N |
A |
P |
A |
I |
A |
I |
pp004666_Pp1s20 |
A |
E |
P |
S |
N |
A |
P |
T |
D |
K |
N |
G |
- |
V |
L |
P |
D |
H |
H |
H |
H |
H |
H |
Y |
H |
H |
H |
H |
H |
H |
H |
H |
H |
E |
D |
E |
V |
R |
A |
G |
L |
P |
A |
P |
K |
Q |
S |
C |
D |
R |
D |
A |
S |
N |
A |
P |
A |
I |
A |
I |
|
AT4G38960.1 |
N |
G |
N |
G |
E |
A |
N |
G |
K |
I |
D |
D |
- |
- |
- |
- |
- |
- |
- |
E |
M |
I |
D |
L |
N |
A |
N |
P |
Q |
R |
V |
H |
E |
P |
S |
S |
N |
N |
N |
G |
I |
D |
V |
N |
N |
E |
N |
N |
H |
E |
P |
A |
G |
L |
V |
P |
V |
G |
P |
F |
pp035016_Pp1s31 |
A |
A |
G |
D |
E |
E |
S |
L |
L |
L |
D |
D |
C |
L |
V |
Q |
N |
Q |
S |
R |
M |
I |
D |
L |
N |
S |
R |
P |
K |
R |
L |
Q |
N |
Q |
A |
S |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
V |
P |
- |
- |
- |
- |
pp004666_Pp1s20 |
T |
A |
G |
D |
E |
E |
S |
L |
L |
I |
D |
G |
C |
I |
H |
Q |
N |
Q |
P |
R |
M |
I |
D |
L |
N |
S |
R |
P |
K |
R |
L |
Q |
S |
Q |
A |
S |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
V |
P |
- |
- |
- |
- |
|
AT4G38960.1 |
K |
R |
E |
S |
E |
K |
- |
pp035016_Pp1s31 |
- |
- |
- |
- |
D |
K |
G |
pp004666_Pp1s20 |
- |
- |
- |
- |
D |
K |
G |
|
|