fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G39070.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt021612 not found in 215aa AT4G39070.1 not_1st 0.451834862 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G39070.1     MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSLTSPTFKDAPLCDI
pt021612_POPTR_ MKIRCDVCDKVEATVFCCADEAALCDGCDHRVHHANTLASKHSRFSLVHPSFKESPLCDI
                *** * **** **:***********:***::**.**.**.** ****. *:**::*****

AT4G39070.1     CGERRALLFCQEDRAILCRECDIPIHQANEHTKKHNRFLLTGVKISASPSAYPRASN-SN
pt021612_POPTR_ CQERRAVLFCQEDRAILCRECDLPIHKVNEHTQKHNRFLLTGVKL-CGPSLYATSSSASN
                * ****:***************:***:.****:***********: ..** *. :*. **

AT4G39070.1     SAAAFGRAKTRPKSVSSEVPSSASNEVFTSSSSTTTS-NCYYGIEENYHHVSDSGSGSGC
pt021612_POPTR_ CDANINTTRNRNHQHYLKKPISASNEIFSSPSVATASPPTAYSYDDN--HV--SGGGSVS
                . * :. ::.* :.   : * *****:*:*.* :*:*    *. ::*  **  **.** .

AT4G39070.1     TGSISEYLMETLPGWRVEDLLEHPSCVSYEDNIITNNNNSESYRVYDGSSQFHHQGFWDH
pt021612_POPTR_ TSSISEYLETVVPGWRVDDFLD-PSFTS-------NNSFSKGW----------------N
                *.******  .:*****:*:*: ** .*       **. *:.:                :

AT4G39070.1     KPFS
pt021612_POPTR_ APYI
                 *:
BoxShade v3.31 C (beta, 970507) Output
AT4G39070.1     M K I W C A V C D K E E A S V F C C A D E A A L C N G C D R H V H F A N K L A G K H L R F S L T S P T F K D A P L C D I
pt021612_POPTR_    M K I R C D V C D K V E A T V F C C A D E A A L C D G C D H R V H H A N T L A S K H S R F S L V H P S F K E S P L C D I
 
AT4G39070.1     C G E R R A L L F C Q E D R A I L C R E C D I P I H Q A N E H T K K H N R F L L T G V K I S A S P S A Y P R A S N - S N
pt021612_POPTR_    C Q E R R A V L F C Q E D R A I L C R E C D L P I H K V N E H T Q K H N R F L L T G V K L - C G P S L Y A T S S S A S N
 
AT4G39070.1     S A A A F G R A K T R P K S V S S E V P S S A S N E V F T S S S S T T T S - N C Y Y G I E E N Y H H V S D S G S G S G C
pt021612_POPTR_    C D A N I N T T R N R N H Q H Y L K K P I S A S N E I F S S P S V A T A S P P T A Y S Y D D N - - H V - - S G G G S V S
 
AT4G39070.1     T G S I S E Y L M E T L P G W R V E D L L E H P S C V S Y E D N I I T N N N N S E S Y R V Y D G S S Q F H H Q G F W D H
pt021612_POPTR_    T S S I S E Y L E T V V P G W R V D D F L D - P S F T S - - - - - - - N N S F S K G W - - - - - - - - - - - - - - - - N
 
AT4G39070.1     K P F S
pt021612_POPTR_    A P Y I
 
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