fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G39070.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm008490 not found in 319aa AT4G39070.1 1st_1st 0.454128440 Ia
Pt019122 not found in 299aa AT4G39070.1 1st_1st 0.479357798 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G39070.1     MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSLTSPTFKDAPLCDI
gm008490_Glyma0 MKIQCAVCDKVEASVFCSADEAALCHSCDRTIHHANKLATKHPRFSLHYPTSQDFPLCDI
pt019122_POPTR_ MKIRCDVCDNVEATVFCCADEAALCDGCDHRVHHANKLASKHSRFSLVHPSFKESPLCDI
                *** * ***: **:***.*******..**: :*.***** ** ****  *: :: *****

AT4G39070.1     CGERRALLFCQEDRAILCRECDIPIHQANEHTKKHNRFLLTGVKISASPSAYPRASNSNS
gm008490_Glyma0 CQERRAYLFCQEDRALLCRECDVPIHRANEHTQKHNRFLLTGVKLSGT-SLDPAASSTNC
pt019122_POPTR_ CQERRALLFCQEDRAILCRECDLPIHKANEHTQKHNRFLLTGVKLSASSSLHTASSTSTN
                * **** ********:******:***:*****:***********:*.: *  . :*.:. 

AT4G39070.1     AAAFGRAKTRPKSVSSEVPSSA----------SNEVFTSSS-STTTSNCYYGIEENYHHV
gm008490_Glyma0 ------------THGSEGRNNA-RSR------MNRPRSSVSNEENASNSSCKVEDN--VA
pt019122_POPTR_ ------------NFDSNINTTSNRNHQPYLKNSNEILSSPSVETASATTAYNFEEN--HV
                            . .*:  ..:           *.  :* * .  ::.    .*:*   .

AT4G39070.1     SDSGSGSGCTGSISEYLMETLPGWRVEDLLEHPSCVSYEDNIITNNNNSESYRVY-----
gm008490_Glyma0 SDTGSVS--TSSISEYLIETIPGYCFEDLLD-ASFAP---NGFCKNQNYDRHRRFRTKIF
pt019122_POPTR_ SDNGSIS--TSSISEYL-ETVPGWRIDDFLD-PSFAS--------NNDLESNRSSFST--
                **.** *  *.****** **:**: .:*:*: .* ..        *:: :  *       

AT4G39070.1     ------------------------------------------------------------
gm008490_Glyma0 KLLGRVWF----------ELRRF-------QNLNAIDDQLFVKICWKISSFVFVICISFW
pt019122_POPTR_ EDLG---FSVPQVTLHLPQLHRYIPQPGLPSGFSQSKEASKMKVSWE------------W
                                                                            

AT4G39070.1     -------DG-------------SSQFHHQ----------------------GFWDHKPFS
gm008490_Glyma0 APCCILYDFFFILY--------SRPLFRPLILVFFSIFIGLINNIFWGGVHAFIDMNMNS
pt019122_POPTR_ S-----EDGLTVPQISPRSVKKSRHFHSRLF-------------------DQFFNCKTSS
                       *              *  :.                         * : :  *

AT4G39070.1     ------------
gm008490_Glyma0 LNNATEYYVPLS
pt019122_POPTR_ L-----FRCPM-
BoxShade v3.31 C (beta, 970507) Output
AT4G39070.1     M K I W C A V C D K E E A S V F C C A D E A A L C N G C D R H V H F A N K L A G K H L R F S L T S P T F K D A P L C D I
gm008490_Glyma0    M K I Q C A V C D K V E A S V F C S A D E A A L C H S C D R T I H H A N K L A T K H P R F S L H Y P T S Q D F P L C D I
pt019122_POPTR_    M K I R C D V C D N V E A T V F C C A D E A A L C D G C D H R V H H A N K L A S K H S R F S L V H P S F K E S P L C D I
 
AT4G39070.1     C G E R R A L L F C Q E D R A I L C R E C D I P I H Q A N E H T K K H N R F L L T G V K I S A S P S A Y P R A S N S N S
gm008490_Glyma0    C Q E R R A Y L F C Q E D R A L L C R E C D V P I H R A N E H T Q K H N R F L L T G V K L S G T - S L D P A A S S T N C
pt019122_POPTR_    C Q E R R A L L F C Q E D R A I L C R E C D L P I H K A N E H T Q K H N R F L L T G V K L S A S S S L H T A S S T S T N
 
AT4G39070.1     A A A F G R A K T R P K S V S S E V P S S A - - - - - - - - - - S N E V F T S S S - S T T T S N C Y Y G I E E N Y H H V
gm008490_Glyma0    - - - - - - - - - - - - T H G S E G R N N A - R S R - - - - - - M N R P R S S V S N E E N A S N S S C K V E D N - - V A
pt019122_POPTR_    - - - - - - - - - - - - N F D S N I N T T S N R N H Q P Y L K N S N E I L S S P S V E T A S A T T A Y N F E E N - - H V
 
AT4G39070.1     S D S G S G S G C T G S I S E Y L M E T L P G W R V E D L L E H P S C V S Y E D N I I T N N N N S E S Y R V Y - - - - -
gm008490_Glyma0    S D T G S V S - - T S S I S E Y L I E T I P G Y C F E D L L D - A S F A P - - - N G F C K N Q N Y D R H R R F R T K I F
pt019122_POPTR_    S D N G S I S - - T S S I S E Y L - E T V P G W R I D D F L D - P S F A S - - - - - - - - N N D L E S N R S S F S T - -
 
AT4G39070.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm008490_Glyma0    K L L G R V W F - - - - - - - - - - E L R R F - - - - - - - Q N L N A I D D Q L F V K I C W K I S S F V F V I C I S F W
pt019122_POPTR_    E D L G - - - F S V P Q V T L H L P Q L H R Y I P Q P G L P S G F S Q S K E A S K M K V S W E - - - - - - - - - - - - W
 
AT4G39070.1     - - - - - - - D G - - - - - - - - - - - - - S S Q F H H Q - - - - - - - - - - - - - - - - - - - - - - G F W D H K P F S
gm008490_Glyma0    A P C C I L Y D F F F I L Y - - - - - - - - S R P L F R P L I L V F F S I F I G L I N N I F W G G V H A F I D M N M N S
pt019122_POPTR_    S - - - - - E D G L T V P Q I S P R S V K K S R H F H S R L F - - - - - - - - - - - - - - - - - - - D Q F F N C K T S S
 
AT4G39070.1     - - - - - - - - - - - -
gm008490_Glyma0    L N N A T E Y Y V P L S
pt019122_POPTR_    L - - - - - F R C P M -
 
0