fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G39070.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt002589 not found in 283aa AT1G75540.1 not_not 0.433486238 III
Pt002588 not found in 311aa AT1G75540.1 not_not 0.431192660 III
Pt038624 not found in 310aa AT1G75540.1 not_not 0.428899082 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G39070.1     MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSLTSPTFKDAPLCDI
pt038624_POPTR_ MKIQCDVCNKEEASVFCTADEAALCDTCDHRVHHANKLASKHQRFSLLHPSSKNFPICDI
pt002588_POPTR_ MKIQCDVCSKEEASVFCTADEAALCDTCDHRVHHANKLASKHQRFSLLHPSSKNFPICDI
pt002589_POPTR_ MKIQCDVCSKEEASVFCTADEAALCDTCDHRVHHANKLASKHQRFSLLHPSSKNFPICDI
                *** * **.******** *******: **::**.*****.** ****  *: *: *:***

AT4G39070.1     CGERRALLFCQEDRAILCRECDIPIHQANEHTKKHNRFLLTGVKISASPSAYPRASNSNS
pt038624_POPTR_ CQEKRAFLFCQQDRAILCRECDGPIHTANEHTQKHNRFLLTGVKLSATSAVY--ISSSSV
pt002588_POPTR_ CQDKRAFLFCQQDRAILCRDCDGPIHTANEHTQKHNRFLLTGVKLSATSAVY--MSSSSS
pt002589_POPTR_ CQDKRAFLFCQQDRAILCRDCDGPIHTANEHTQKHNRFLLTGVKLSATSAVY--MSSSSS
                * ::**:****:*******:** *** *****:***********:**:.:.*   *.*. 

AT4G39070.1     AAAFGRAKTRPKS------------------VSSEVPSSASNEVFTSSSSTTTSNCYYGI
pt038624_POPTR_ TNSGGDLVPDSKSQQQQQQQQSIKKPVFDAPVNSNPPTVPS----TLSTNTEVN------
pt002588_POPTR_ VTSSGDLVPDSKSQKQQQQQL-IKKPVSVAPVNSNPPAVPS----TLSANTVIN------
pt002589_POPTR_ VT-----------------------------MNSNPPAVPS----TLSANTVIN------
                .                              :.*: *: .*    * *:.*  .      

AT4G39070.1     EENYHHVSDSGSGSGCTGSISEYLMETLPGWRVEDLLEHPSCVSY-----EDNII-----
pt038624_POPTR_ KGGDNLVTNEGFGSTTSSTISEYLMETLPGWHVEDFLD-SSTTPFGFCKIDDGLLPFMDA
pt002588_POPTR_ KDGDNLVTSEGFGSTTSSTISEYLMETLPGWHVEEFLDSSSTTPFGFSKIDDGLLPYMDT
pt002589_POPTR_ KDGDNLVTSEGFGSTTSSTISEYLMETLPGWHVEEFLDSSSTTPFGFSKIDDGLLPYMDT
                : . : *:..* **  :.:************:**::*: .* ..:     :*.::     

AT4G39070.1     ------TNNNNSESYRVYD---------GSSQFHH------QGFWDHKPFS---------
pt038624_POPTR_ HDLESNMSSFSSESLGLWVPQAPSTPY-TSQQYYYPQLVGQSGFKEIKETTNMKANRRLA
pt002588_POPTR_ HDLERNMSSFSSESLGLWVPQAPTPPLCTSQQYYYPQLVGQSGFKETKESTNMKANRRLT
pt002589_POPTR_ HDLERNMSSFSSESLGLWVPQAPTPPLCTSQQYYYPQLVGQSGFKETKESTNMKANRRLT
                       .. .***  ::           *.*:::      .** : *  :         

AT4G39070.1     ------------------------
pt038624_POPTR_ DDVFTVPQISLPANISSKRSRPLW
pt002588_POPTR_ DDAFTVPQISPPSNIGSKRSRPLW
pt002589_POPTR_ DDAFTVPQISPPSNIGSKRSRPLW
BoxShade v3.31 C (beta, 970507) Output
AT4G39070.1     M K I W C A V C D K E E A S V F C C A D E A A L C N G C D R H V H F A N K L A G K H L R F S L T S P T F K D A P L C D I
pt038624_POPTR_    M K I Q C D V C N K E E A S V F C T A D E A A L C D T C D H R V H H A N K L A S K H Q R F S L L H P S S K N F P I C D I
pt002588_POPTR_    M K I Q C D V C S K E E A S V F C T A D E A A L C D T C D H R V H H A N K L A S K H Q R F S L L H P S S K N F P I C D I
pt002589_POPTR_    M K I Q C D V C S K E E A S V F C T A D E A A L C D T C D H R V H H A N K L A S K H Q R F S L L H P S S K N F P I C D I
 
AT4G39070.1     C G E R R A L L F C Q E D R A I L C R E C D I P I H Q A N E H T K K H N R F L L T G V K I S A S P S A Y P R A S N S N S
pt038624_POPTR_    C Q E K R A F L F C Q Q D R A I L C R E C D G P I H T A N E H T Q K H N R F L L T G V K L S A T S A V Y - - I S S S S V
pt002588_POPTR_    C Q D K R A F L F C Q Q D R A I L C R D C D G P I H T A N E H T Q K H N R F L L T G V K L S A T S A V Y - - M S S S S S
pt002589_POPTR_    C Q D K R A F L F C Q Q D R A I L C R D C D G P I H T A N E H T Q K H N R F L L T G V K L S A T S A V Y - - M S S S S S
 
AT4G39070.1     A A A F G R A K T R P K S - - - - - - - - - - - - - - - - - - V S S E V P S S A S N E V F T S S S S T T T S N C Y Y G I
pt038624_POPTR_    T N S G G D L V P D S K S Q Q Q Q Q Q Q Q S I K K P V F D A P V N S N P P T V P S - - - - T L S T N T E V N - - - - - -
pt002588_POPTR_    V T S S G D L V P D S K S Q K Q Q Q Q Q L - I K K P V S V A P V N S N P P A V P S - - - - T L S A N T V I N - - - - - -
pt002589_POPTR_    V T - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M N S N P P A V P S - - - - T L S A N T V I N - - - - - -
 
AT4G39070.1     E E N Y H H V S D S G S G S G C T G S I S E Y L M E T L P G W R V E D L L E H P S C V S Y - - - - - E D N I I - - - - -
pt038624_POPTR_    K G G D N L V T N E G F G S T T S S T I S E Y L M E T L P G W H V E D F L D - S S T T P F G F C K I D D G L L P F M D A
pt002588_POPTR_    K D G D N L V T S E G F G S T T S S T I S E Y L M E T L P G W H V E E F L D S S S T T P F G F S K I D D G L L P Y M D T
pt002589_POPTR_    K D G D N L V T S E G F G S T T S S T I S E Y L M E T L P G W H V E E F L D S S S T T P F G F S K I D D G L L P Y M D T
 
AT4G39070.1     - - - - - - T N N N N S E S Y R V Y D - - - - - - - - - G S S Q F H H - - - - - - Q G F W D H K P F S - - - - - - - - -
pt038624_POPTR_    H D L E S N M S S F S S E S L G L W V P Q A P S T P Y - T S Q Q Y Y Y P Q L V G Q S G F K E I K E T T N M K A N R R L A
pt002588_POPTR_    H D L E R N M S S F S S E S L G L W V P Q A P T P P L C T S Q Q Y Y Y P Q L V G Q S G F K E T K E S T N M K A N R R L T
pt002589_POPTR_    H D L E R N M S S F S S E S L G L W V P Q A P T P P L C T S Q Q Y Y Y P Q L V G Q S G F K E T K E S T N M K A N R R L T
 
AT4G39070.1     - - - - - - - - - - - - - - - - - - - - - - - -
pt038624_POPTR_    D D V F T V P Q I S L P A N I S S K R S R P L W
pt002588_POPTR_    D D A F T V P Q I S P P S N I G S K R S R P L W
pt002589_POPTR_    D D A F T V P Q I S P P S N I G S K R S R P L W
 
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