fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G39070.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt019122 not found in 299aa AT4G39070.1 1st_1st 0.479357798 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G39070.1     MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSLTSPTFKDAPLCDI
pt019122_POPTR_ MKIRCDVCDNVEATVFCCADEAALCDGCDHRVHHANKLASKHSRFSLVHPSFKESPLCDI
                *** * ***: **:***********:***::**.*****.** ****. *:**::*****

AT4G39070.1     CGERRALLFCQEDRAILCRECDIPIHQANEHTKKHNRFLLTGVKISASPSAYPRASNSNS
pt019122_POPTR_ CQERRALLFCQEDRAILCRECDLPIHKANEHTQKHNRFLLTGVKLSASSSLHTASSTSTN
                * ********************:***:*****:***********:***.* :. :*.*..

AT4G39070.1     AAAFGRAKTRPKSVSSEVPSSA----------SNEVFTSSS-STTTSNCYYGIEENYHHV
pt019122_POPTR_ ------------NFDSNINTTSNRNHQPYLKNSNEILSSPSVETASATTAYNFEEN--HV
                            ...*:: :::          ***:::*.* .*:::.  *.:***  **

AT4G39070.1     SDSGSGSGCTGSISEYLMETLPGWRVEDLLEHPSCVSYEDNIITNNNNSESYRVY-----
pt019122_POPTR_ SDNGSIS--TSSISEYL-ETVPGWRIDDFLD-PSFAS--------NNDLESNRSSFSTED
                **.** *  *.****** **:****::*:*: ** .*        **: ** *       

AT4G39070.1     ---------------------------------------------DG-------------
pt019122_POPTR_ LGFSVPQVTLHLPQLHRYIPQPGLPSGFSQSKEASKMKVSWEWSEDGLTVPQISPRSVKK
                                                             **             

AT4G39070.1     SSQFHHQ---GFWDHKPFS------
pt019122_POPTR_ SRHFHSRLFDQFFNCKTSSLFRCPM
                * :** :    *:: *. *
BoxShade v3.31 C (beta, 970507) Output
AT4G39070.1     M K I W C A V C D K E E A S V F C C A D E A A L C N G C D R H V H F A N K L A G K H L R F S L T S P T F K D A P L C D I
pt019122_POPTR_    M K I R C D V C D N V E A T V F C C A D E A A L C D G C D H R V H H A N K L A S K H S R F S L V H P S F K E S P L C D I
 
AT4G39070.1     C G E R R A L L F C Q E D R A I L C R E C D I P I H Q A N E H T K K H N R F L L T G V K I S A S P S A Y P R A S N S N S
pt019122_POPTR_    C Q E R R A L L F C Q E D R A I L C R E C D L P I H K A N E H T Q K H N R F L L T G V K L S A S S S L H T A S S T S T N
 
AT4G39070.1     A A A F G R A K T R P K S V S S E V P S S A - - - - - - - - - - S N E V F T S S S - S T T T S N C Y Y G I E E N Y H H V
pt019122_POPTR_    - - - - - - - - - - - - N F D S N I N T T S N R N H Q P Y L K N S N E I L S S P S V E T A S A T T A Y N F E E N - - H V
 
AT4G39070.1     S D S G S G S G C T G S I S E Y L M E T L P G W R V E D L L E H P S C V S Y E D N I I T N N N N S E S Y R V Y - - - - -
pt019122_POPTR_    S D N G S I S - - T S S I S E Y L - E T V P G W R I D D F L D - P S F A S - - - - - - - - N N D L E S N R S S F S T E D
 
AT4G39070.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - D G - - - - - - - - - - - - -
pt019122_POPTR_    L G F S V P Q V T L H L P Q L H R Y I P Q P G L P S G F S Q S K E A S K M K V S W E W S E D G L T V P Q I S P R S V K K
 
AT4G39070.1     S S Q F H H Q - - - G F W D H K P F S - - - - - -
pt019122_POPTR_    S R H F H S R L F D Q F F N C K T S S L F R C P M
 
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