fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G39070.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm008490 not found in 319aa AT4G39070.1 1st_1st 0.454128440 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G39070.1     MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSLTSPTFKDAPLCDI
gm008490_Glyma0 MKIQCAVCDKVEASVFCSADEAALCHSCDRTIHHANKLATKHPRFSLHYPTSQDFPLCDI
                *** ****** ******.*******:.*** :*.***** ** ****  ** :* *****

AT4G39070.1     CGERRALLFCQEDRAILCRECDIPIHQANEHTKKHNRFLLTGVKISASPSAYPRASNSN-
gm008490_Glyma0 CQERRAYLFCQEDRALLCRECDVPIHRANEHTQKHNRFLLTGVKLSGT-SLDPAASSTNC
                * **** ********:******:***:*****:***********:*.: *  * **.:* 

AT4G39070.1     SAAAFGRAKTRPKSVSSEVPSSASNEVFTSSSSTTTSNCYYGIEENYHHVSDSGSGSGCT
gm008490_Glyma0 THGSEGRNNAR--SRMNRPRSSVSNEENASNSSCK-------VEDNV--ASDTGSVS--T
                : .: ** ::*  *  ..  **.***  :*.** .       :*:*   .**:** *  *

AT4G39070.1     GSISEYLMETLPGWRVEDLLEHPSCVSYEDNIITNNNNSESYRVYD-------GSSQFHH
gm008490_Glyma0 SSISEYLIETIPGYCFEDLLD----ASFAPNGFCKNQNYDRHRRFRTKIFKLLGRVWFEL
                .******:**:**: .****:    .*:  * : :*:* : :* :        *   *. 

AT4G39070.1     Q-----------------------------GFWD--------------------------
gm008490_Glyma0 RRFQNLNAIDDQLFVKICWKISSFVFVICISFWAPCCILYDFFFILYSRPLFRPLILVFF
                :                             .**                           

AT4G39070.1     --------------------------------HKPFS
gm008490_Glyma0 SIFIGLINNIFWGGVHAFIDMNMNSLNNATEYYVPLS
                                                : *:*
BoxShade v3.31 C (beta, 970507) Output
AT4G39070.1     M K I W C A V C D K E E A S V F C C A D E A A L C N G C D R H V H F A N K L A G K H L R F S L T S P T F K D A P L C D I
gm008490_Glyma0    M K I Q C A V C D K V E A S V F C S A D E A A L C H S C D R T I H H A N K L A T K H P R F S L H Y P T S Q D F P L C D I
 
AT4G39070.1     C G E R R A L L F C Q E D R A I L C R E C D I P I H Q A N E H T K K H N R F L L T G V K I S A S P S A Y P R A S N S N -
gm008490_Glyma0    C Q E R R A Y L F C Q E D R A L L C R E C D V P I H R A N E H T Q K H N R F L L T G V K L S G T - S L D P A A S S T N C
 
AT4G39070.1     S A A A F G R A K T R P K S V S S E V P S S A S N E V F T S S S S T T T S N C Y Y G I E E N Y H H V S D S G S G S G C T
gm008490_Glyma0    T H G S E G R N N A R - - S R M N R P R S S V S N E E N A S N S S C K - - - - - - - V E D N V - - A S D T G S V S - - T
 
AT4G39070.1     G S I S E Y L M E T L P G W R V E D L L E H P S C V S Y E D N I I T N N N N S E S Y R V Y D - - - - - - - G S S Q F H H
gm008490_Glyma0    S S I S E Y L I E T I P G Y C F E D L L D - - - - A S F A P N G F C K N Q N Y D R H R R F R T K I F K L L G R V W F E L
 
AT4G39070.1     Q - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G F W D - - - - - - - - - - - - - - - - - - - - - - - - - -
gm008490_Glyma0    R R F Q N L N A I D D Q L F V K I C W K I S S F V F V I C I S F W A P C C I L Y D F F F I L Y S R P L F R P L I L V F F
 
AT4G39070.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - H K P F S
gm008490_Glyma0    S I F I G L I N N I F W G G V H A F I D M N M N S L N N A T E Y Y V P L S
 
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