fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G39160.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm029430 not found in 221aa AT4G39160.1 1st_1st 0.087525150 Ib
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G39160.1     MDLDFDDQPSDHAAPAVRAGARFKPKGRPQPKKKQVSLSTTQTTLSPDVAQEKLSTQSED
gm029430_Glyma1 ------------------------------------------------------------
                                                                            

AT4G39160.1     LVPLDGSSEIPSNALPSETNVPDSGSINKSTIGTLSEE---NEDAFPRGVHWSVKPSILR
gm029430_Glyma1 ---------MTSN----------TSSTNQSGGDSLHEAGSYNEGAY--------------
                         :.**          :.* *:*  .:* *    **.*:              

AT4G39160.1     ACNNVNLVGNRRDDGIEATTSFPDDPRTQDSAIFGDYVTPETGADEGRVDMETLDIVQEE
gm029430_Glyma1 ------------DDG---------------------------------------------
                            ***                                             

AT4G39160.1     GTTSSYVQHTGKLQPKPRLLETVVEEPEPHYSAGDTGYFPMGTNESEFMANVESRNGFST
gm029430_Glyma1 --------------------------------AYDDGAY----NDEEFLGSEDGRDPYD-
                                                * * * :    *:.**:.. :.*: :. 

AT4G39160.1     YEDLQEEELNIPEAPRETVGEMEAQNASGGWEQEEQGVSPCINNTVTGEEENCMGNTVEE
gm029430_Glyma1 ------------------------------------------------------------
                                                                            

AT4G39160.1     QSKRESKTGKSKRATSRKRKKTSEEPNKSSEKTEQKKFKHSSRRQKRTLEKELLETPDHE
gm029430_Glyma1 --------------------------NQANE-----------------------------
                                          *::.*                             

AT4G39160.1     IRSLPLRDMLRLVEYKEWMQKKEAKGAGVQPSQESNNMNGSGSQYHSQGFDEEDEFGDFG
gm029430_Glyma1 -----------------------------------------------------------G
                                                                           *

AT4G39160.1     IESSEYQENNVVKPDSPVNYQTYM-NKTSRTRWSKEDTELFYEGIQEFGSNLSMIQQ-LF
gm029430_Glyma1 ITSTSVL----------LNYQSFREKKTPRGKWSKQETELFYEAVREMGTDFSVIQKTFF
                * *:.            :***::  :**.* :***::******.::*:*:::*:**: :*

AT4G39160.1     PERTREQMKLKFKLEERRNPLKLNDALSSRSKHFTHFKNVIKKLQQEAAAAKE--GEEEE
gm029430_Glyma1 PDKTRHQIKLKYKKEERQQPLQLTDAVNNSAKDHPHSKLFIELLKLASTKAEEYPGRDAS
                *::**.*:***:* ***::**:*.**:.. :*...* * .*: *:  :: *:*  *.: .

AT4G39160.1     EAGAEAETTDVPENEEPEKSEETERASDGVAAGVKESDGGDVENGVRSDGGDECDDD---
gm029430_Glyma1 DLVMAEEVVD-------------------LTAGTH----------VCTFGLFSLSFDISL
                :     *..*                   ::**.:          * : *  . . *   

AT4G39160.1     ------EDFWNSYKSDM----
gm029430_Glyma1 FLVQIIYDFSGLFIREIFLIA
                       ** . :  ::
BoxShade v3.31 C (beta, 970507) Output
AT4G39160.1     M D L D F D D Q P S D H A A P A V R A G A R F K P K G R P Q P K K K Q V S L S T T Q T T L S P D V A Q E K L S T Q S E D
gm029430_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT4G39160.1     L V P L D G S S E I P S N A L P S E T N V P D S G S I N K S T I G T L S E E - - - N E D A F P R G V H W S V K P S I L R
gm029430_Glyma1    - - - - - - - - - M T S N - - - - - - - - - - T S S T N Q S G G D S L H E A G S Y N E G A Y - - - - - - - - - - - - - -
 
AT4G39160.1     A C N N V N L V G N R R D D G I E A T T S F P D D P R T Q D S A I F G D Y V T P E T G A D E G R V D M E T L D I V Q E E
gm029430_Glyma1    - - - - - - - - - - - - D D G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT4G39160.1     G T T S S Y V Q H T G K L Q P K P R L L E T V V E E P E P H Y S A G D T G Y F P M G T N E S E F M A N V E S R N G F S T
gm029430_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A Y D D G A Y - - - - N D E E F L G S E D G R D P Y D -
 
AT4G39160.1     Y E D L Q E E E L N I P E A P R E T V G E M E A Q N A S G G W E Q E E Q G V S P C I N N T V T G E E E N C M G N T V E E
gm029430_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT4G39160.1     Q S K R E S K T G K S K R A T S R K R K K T S E E P N K S S E K T E Q K K F K H S S R R Q K R T L E K E L L E T P D H E
gm029430_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - N Q A N E - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT4G39160.1     I R S L P L R D M L R L V E Y K E W M Q K K E A K G A G V Q P S Q E S N N M N G S G S Q Y H S Q G F D E E D E F G D F G
gm029430_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G
 
AT4G39160.1     I E S S E Y Q E N N V V K P D S P V N Y Q T Y M - N K T S R T R W S K E D T E L F Y E G I Q E F G S N L S M I Q Q - L F
gm029430_Glyma1    I T S T S V L - - - - - - - - - - L N Y Q S F R E K K T P R G K W S K Q E T E L F Y E A V R E M G T D F S V I Q K T F F
 
AT4G39160.1     P E R T R E Q M K L K F K L E E R R N P L K L N D A L S S R S K H F T H F K N V I K K L Q Q E A A A A K E - - G E E E E
gm029430_Glyma1    P D K T R H Q I K L K Y K K E E R Q Q P L Q L T D A V N N S A K D H P H S K L F I E L L K L A S T K A E E Y P G R D A S
 
AT4G39160.1     E A G A E A E T T D V P E N E E P E K S E E T E R A S D G V A A G V K E S D G G D V E N G V R S D G G D E C D D D - - -
gm029430_Glyma1    D L V M A E E V V D - - - - - - - - - - - - - - - - - - - L T A G T H - - - - - - - - - - V C T F G L F S L S F D I S L
 
AT4G39160.1     - - - - - - E D F W N S Y K S D M - - - -
gm029430_Glyma1    F L V Q I I Y D F S G L F I R E I F L I A
 
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