fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G39250.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt018851 not found in 99aa AT4G39250.1 1st_1st 0.693548387 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G39250.1     MASSSMSSQSSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLV
pt018851_POPTR_ MASSSVSSRGSGSWTAQQNKAFERALAVYDRDTPDRWHNVARAVGGKTAEEVKRHYEILV
                *****:**:.******:******:***.**:***:**:***:.*****:********:**

AT4G39250.1     QDINSIENGHVPFPNYRTSGGCTNGRL-SQEEKRMRNMRLQ
pt018851_POPTR_ EDVKHIESGRVPFPNYRTTGA--NGHSKTGEEKMMKNMKLQ
                :*:: **.*:********:*.  **:  : *** *:**:**
BoxShade v3.31 C (beta, 970507) Output
AT4G39250.1     M A S S S M S S Q S S G S W T A K Q N K A F E Q A L A T Y D Q D T P N R W Q N V A K V V G G K T T E E V K R H Y E L L V
pt018851_POPTR_    M A S S S V S S R G S G S W T A Q Q N K A F E R A L A V Y D R D T P D R W H N V A R A V G G K T A E E V K R H Y E I L V
 
AT4G39250.1     Q D I N S I E N G H V P F P N Y R T S G G C T N G R L - S Q E E K R M R N M R L Q
pt018851_POPTR_    E D V K H I E S G R V P F P N Y R T T G A - - N G H S K T G E E K M M K N M K L Q
 
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