fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G39250.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp014546 not found in 302aa AT5G08520.1 1st_not 0.467741935 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G39250.1     MA--SSSMSSQSSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYEL
pp014546_Pp1s25 MAESQSSLTTASGSVWTREQDKEFENALNNFDEDTPNRWEQIAAVVTGKDAAEVKRHYEI
                **  .**::: *.. ** :*:* **:** .:*:******:::* ** ** : *******:

AT4G39250.1     LVQDINSIENGHVPFPNYRTSG---------------------------------GCTNG
pp014546_Pp1s25 LQEDVNLIDSGRVALPNYSLSSLSLSEEGAASDSPGVKKGTSFSGQVSGPSANANGNGNA
                * :*:* *:.*:*.:***  *.                                 *  *.

AT4G39250.1     RL--------------------SQEEKRM-----------------RN------------
pp014546_Pp1s25 ALGGKGMSSKSADQERRKGIPWSEEEHRLFLLGLAKFGKGDWRSISRNFVISRTPTQVAS
                 *                    *:**:*:                 **            

AT4G39250.1     ------MRLQ--------------------------------------------------
pp014546_Pp1s25 HAQKYFIRLNSINKDKRRSSIHDITSVNNGDAAQQGQGPITGQPGPGSATGQPIPGGMQP
                      :**:                                                  

AT4G39250.1     ------------------------------------------------------------
pp014546_Pp1s25 GMYPGQQMIGQPPAVGAPVMLPPPGHVSYGPRGHLPRPVMPGQQMGMAPHMSYPMSQPGM
                                                                            

AT4G39250.1     --
pp014546_Pp1s25 HH
BoxShade v3.31 C (beta, 970507) Output
AT4G39250.1     M A - - S S S M S S Q S S G S W T A K Q N K A F E Q A L A T Y D Q D T P N R W Q N V A K V V G G K T T E E V K R H Y E L
pp014546_Pp1s25    M A E S Q S S L T T A S G S V W T R E Q D K E F E N A L N N F D E D T P N R W E Q I A A V V T G K D A A E V K R H Y E I
 
AT4G39250.1     L V Q D I N S I E N G H V P F P N Y R T S G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G C T N G
pp014546_Pp1s25    L Q E D V N L I D S G R V A L P N Y S L S S L S L S E E G A A S D S P G V K K G T S F S G Q V S G P S A N A N G N G N A
 
AT4G39250.1     R L - - - - - - - - - - - - - - - - - - - - S Q E E K R M - - - - - - - - - - - - - - - - - R N - - - - - - - - - - - -
pp014546_Pp1s25    A L G G K G M S S K S A D Q E R R K G I P W S E E E H R L F L L G L A K F G K G D W R S I S R N F V I S R T P T Q V A S
 
AT4G39250.1     - - - - - - M R L Q - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp014546_Pp1s25    H A Q K Y F I R L N S I N K D K R R S S I H D I T S V N N G D A A Q Q G Q G P I T G Q P G P G S A T G Q P I P G G M Q P
 
AT4G39250.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp014546_Pp1s25    G M Y P G Q Q M I G Q P P A V G A P V M L P P P G H V S Y G P R G H L P R P V M P G Q Q M G M A P H M S Y P M S Q P G M
 
AT4G39250.1     - -
pp014546_Pp1s25    H H
 
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