fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G39250.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt000491 not found in 85aa AT4G39250.1 not_1st 0.591397849 II
Pt037449 not found in 78aa AT4G39250.1 not_1st 0.591397849 II
Pt022324 not found in 113aa AT4G39250.1 not_1st 0.559139784 II
Pt036738 not found in 92aa AT4G39250.1 not_1st 0.516129032 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G39250.1     MASSSM--SSQSSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGG-KTTEEVKRHYE
pt037449_POPTR_ MSSNSL-------TSWTPKQNKLFEKALALHDKDTPDRWHNVAKAVGG-KSAEEVKRHYE
pt000491_POPTR_ MASNSLNSSRNCSSSWTPKQNKLFEKALALYDKDTPDRWHNVAKAVGG-KSAEEVERHYE
pt022324_POPTR_ -MSSSYQASRNSRSAWTPRENKLFEKALALFDKDTPDRWQNIAKAVGGVKSAEEVKKHYE
pt036738_POPTR_ MASSSF---PQPSTNWSAEQNKLFENALAIYDKDTPDRWGKIAKIVKG-TTEDEVKQQYE
                  *.*          *:..:** **:*** .*:***:** ::** * * .: :**:::**

AT4G39250.1     LLVQDINSIENGHVPFPNYRTSGGCTNGRLSQEEKRMRN------------MRLQ-
pt037449_POPTR_ ILIKDVREIESGRVPFPNYRSSGNGN------------------------------
pt000491_POPTR_ ILIKDVREIESGRVPFPNYRSSGNSN------------------------------
pt022324_POPTR_ ILIEDLQHIESGRIPIPKYKSSGSCNN--TNEEESEVQDSDRLPIYVCGKWMLLSS
pt036738_POPTR_ ILLDDIKSIESDKVPLPNYKNEGSSKENIIGNEEER--------------------
                :*:.*:. **..::*:*:*:..*. .
BoxShade v3.31 C (beta, 970507) Output
AT4G39250.1     M A S S S M - - S S Q S S G S W T A K Q N K A F E Q A L A T Y D Q D T P N R W Q N V A K V V G G - K T T E E V K R H Y E
pt037449_POPTR_    M S S N S L - - - - - - - T S W T P K Q N K L F E K A L A L H D K D T P D R W H N V A K A V G G - K S A E E V K R H Y E
pt000491_POPTR_    M A S N S L N S S R N C S S S W T P K Q N K L F E K A L A L Y D K D T P D R W H N V A K A V G G - K S A E E V E R H Y E
pt022324_POPTR_    - M S S S Y Q A S R N S R S A W T P R E N K L F E K A L A L F D K D T P D R W Q N I A K A V G G V K S A E E V K K H Y E
pt036738_POPTR_    M A S S S F - - - P Q P S T N W S A E Q N K L F E N A L A I Y D K D T P D R W G K I A K I V K G - T T E D E V K Q Q Y E
 
AT4G39250.1     L L V Q D I N S I E N G H V P F P N Y R T S G G C T N G R L S Q E E K R M R N - - - - - - - - - - - - M R L Q -
pt037449_POPTR_    I L I K D V R E I E S G R V P F P N Y R S S G N G N - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt000491_POPTR_    I L I K D V R E I E S G R V P F P N Y R S S G N S N - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt022324_POPTR_    I L I E D L Q H I E S G R I P I P K Y K S S G S C N N - - T N E E E S E V Q D S D R L P I Y V C G K W M L L S S
pt036738_POPTR_    I L L D D I K S I E S D K V P L P N Y K N E G S S K E N I I G N E E E R - - - - - - - - - - - - - - - - - - - -
 
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