fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G39250.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os002918 not found in 85aa AT2G21650.1 1st_not 0.510752688 II
Os022871 not found in 85aa AT4G39250.1 not_1st 0.456989247 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G39250.1     -MASSSMSSQSSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGG-KTTEEVKRHYEL
Os002918_Os01t0 -MASMSVSSSRAPQWTARQNEQFERALAVYDRDTPERWHNIARAVAG-KSADEVKLYYDL
Os022871_Os05t0 MSGSRSSSPNSKSEWSRKENKMFEEALAYYGEDTPNRWDKVASAMGGIKSAEEIRCHYED
                  .* * *..   .*: ::*: **.*** *..***:**.::* .:.* *:::*:: :*: 

AT4G39250.1     LVQDINSIENGHVPFPNYRTSGGCTNGRLSQEEKRMRNMRLQ
Os002918_Os01t0 LVEDVKRIETGKVPFPAYRCPQPAIAG---------------
Os022871_Os05t0 LTDDVKTIESGRVQFPKYKTQGYWT-----------------
                *.:*:: **.*:* ** *:
BoxShade v3.31 C (beta, 970507) Output
AT4G39250.1     - M A S S S M S S Q S S G S W T A K Q N K A F E Q A L A T Y D Q D T P N R W Q N V A K V V G G - K T T E E V K R H Y E L
Os002918_Os01t0    - M A S M S V S S S R A P Q W T A R Q N E Q F E R A L A V Y D R D T P E R W H N I A R A V A G - K S A D E V K L Y Y D L
Os022871_Os05t0    M S G S R S S S P N S K S E W S R K E N K M F E E A L A Y Y G E D T P N R W D K V A S A M G G I K S A E E I R C H Y E D
 
AT4G39250.1     L V Q D I N S I E N G H V P F P N Y R T S G G C T N G R L S Q E E K R M R N M R L Q
Os002918_Os01t0    L V E D V K R I E T G K V P F P A Y R C P Q P A I A G - - - - - - - - - - - - - - -
Os022871_Os05t0    L T D D V K T I E S G R V Q F P K Y K T Q G Y W T - - - - - - - - - - - - - - - - -
 
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