fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G39250.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os022977 not found in 90aa AT1G75250.2 not_not 0.494623655 III
Os022978 not found in 111aa AT1G75250.1 not_not 0.483870967 III
Os009479 not found in 101aa AT1G19510.1 not_not 0.446236559 III
Os002917 not found in 93aa AT2G21650.1 not_not 0.430107526 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G39250.1     MASSSMS-------------SQSSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGG-
Os002917_Os01t0 MASSSKA-------SSSSSASAASSEWTKQQNKQFERALAVYDTDAPDRWHNVARYMGGA
Os009479_Os02t0 MSS----------------------SWTTKQNKVFERALAIYDRDTPDRWQNVARAVGGG
Os022977_Os05t0 MAQQARA------------------QWPQKQNKLFEQALAVYDKETPDRWHNIARAVGGG
Os022978_Os05t0 MASAAGSKQQQAMMSLPSSRGGGGGGWTQRQNKQFECALAVYDKETPDRWHNIARYMGGA
                *:.                       *. :*** ** *** ** ::*:**:*:*: :** 

AT4G39250.1     KTTEEVKRHYELLVQDINSIENGHVPFPN-YRTSGGC---------TNGRLSQEEKRMRN
Os002917_Os01t0 KSAEEVRRHYERLQADVEQIEAGGVPFSLGYGATPQA-----------GRR---------
Os009479_Os02t0 KSVDDVKRHYEKLIKDVDRIDSTGGHQGSHYNSSNASSSSSSSSSNSRGSANEDQRRRYH
Os022977_Os05t0 KSAEDVKRYYEMLEEDIKHIESGKVPFPA-YRCPAAA-----------GYQAERLKHLKI
Os022978_Os05t0 KSADEVRRHFDHLVEDVSRIESGRVPFPR-YSSSSSSR------GADDGNRSRYLKYQ--
                *:.::*:*::: *  *:. *:         *  .  .           *           

AT4G39250.1     MRLQ
Os002917_Os01t0 ----
Os009479_Os02t0 -NFQ
Os022977_Os05t0 ----
Os022978_Os05t0 ----
BoxShade v3.31 C (beta, 970507) Output
AT4G39250.1     M A S S S M S - - - - - - - - - - - - - S Q S S G S W T A K Q N K A F E Q A L A T Y D Q D T P N R W Q N V A K V V G G -
Os002917_Os01t0    M A S S S K A - - - - - - - S S S S S A S A A S S E W T K Q Q N K Q F E R A L A V Y D T D A P D R W H N V A R Y M G G A
Os009479_Os02t0    M S S - - - - - - - - - - - - - - - - - - - - - - S W T T K Q N K V F E R A L A I Y D R D T P D R W Q N V A R A V G G G
Os022977_Os05t0    M A Q Q A R A - - - - - - - - - - - - - - - - - - Q W P Q K Q N K L F E Q A L A V Y D K E T P D R W H N I A R A V G G G
Os022978_Os05t0    M A S A A G S K Q Q Q A M M S L P S S R G G G G G G W T Q R Q N K Q F E C A L A V Y D K E T P D R W H N I A R Y M G G A
 
AT4G39250.1     K T T E E V K R H Y E L L V Q D I N S I E N G H V P F P N - Y R T S G G C - - - - - - - - - T N G R L S Q E E K R M R N
Os002917_Os01t0    K S A E E V R R H Y E R L Q A D V E Q I E A G G V P F S L G Y G A T P Q A - - - - - - - - - - - G R R - - - - - - - - -
Os009479_Os02t0    K S V D D V K R H Y E K L I K D V D R I D S T G G H Q G S H Y N S S N A S S S S S S S S S N S R G S A N E D Q R R R Y H
Os022977_Os05t0    K S A E D V K R Y Y E M L E E D I K H I E S G K V P F P A - Y R C P A A A - - - - - - - - - - - G Y Q A E R L K H L K I
Os022978_Os05t0    K S A D E V R R H F D H L V E D V S R I E S G R V P F P R - Y S S S S S S R - - - - - - G A D D G N R S R Y L K Y Q - -
 
AT4G39250.1     M R L Q
Os002917_Os01t0    - - - -
Os009479_Os02t0    - N F Q
Os022977_Os05t0    - - - -
Os022978_Os05t0    - - - -
 
0