fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G39250.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os002918 not found in 85aa AT2G21650.1 1st_not 0.510752688 II
Os022977 not found in 90aa AT1G75250.2 not_not 0.494623655 III
Os022978 not found in 111aa AT1G75250.1 not_not 0.483870967 III
Os022871 not found in 85aa AT4G39250.1 not_1st 0.456989247 II
Os009479 not found in 101aa AT1G19510.1 not_not 0.446236559 III
Os002917 not found in 93aa AT2G21650.1 not_not 0.430107526 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G39250.1     MASSS--------MSSQSS-----GSWTAKQNKAFEQALATYDQDTPNRWQNVAKVV-GG
Os002918_Os01t0 MAS----------MSVSSSRA---PQWTARQNEQFERALAVYDRDTPERWHNIARAV-AG
Os002917_Os01t0 MASSSKA-------SSSSSASAASSEWTKQQNKQFERALAVYDTDAPDRWHNVARYMGGA
Os022977_Os05t0 MA--------------QQARA----QWPQKQNKLFEQALAVYDKETPDRWHNIARAVGGG
Os009479_Os02t0 MSS----------------------SWTTKQNKVFERALAIYDRDTPDRWQNVARAVGGG
Os022978_Os05t0 MASAAGSKQQQAMMSLPSSRGGGGGGWTQRQNKQFECALAVYDKETPDRWHNIARYMGGA
Os022871_Os05t0 MSGSR--------SSSPNSKS----EWSRKENKMFEEALAYYGEDTPNRWDKVASAMGGI
                *:                        *. ::*: ** *** *. ::*:**.::*  : . 

AT4G39250.1     KTTEEVKRHYELLVQDINSIEN-GHVPFPN-YRTS---------GGCTNGRLSQEEKRMR
Os002918_Os01t0 KSADEVKLYYDLLVEDVKRIET-GKVPFPA-YRCP---------QPAIAG----------
Os002917_Os01t0 KSAEEVRRHYERLQADVEQIEA-GGVPFSLGYGA----------TPQA-------GRR--
Os022977_Os05t0 KSAEDVKRYYEMLEEDIKHIES-GKVPFPA-YRC-----------PAAAGY--Q-AERLK
Os009479_Os02t0 KSVDDVKRHYEKLIKDVDRIDSTGGHQGSH-YNSSNASSSSSSSSSNSRGS-ANEDQRRR
Os022978_Os05t0 KSADEVRRHFDHLVEDVSRIES-GRVPFPR-YSS----------SSSSRGA--DDGNRSR
Os022871_Os05t0 KSAEEIRCHYEDLTDDVKTIES-GRVQFPK-YKT--------------QGYWT-------
                *:.:::: ::: *  *:. *:  *    .  *                            

AT4G39250.1     NMRLQ
Os002918_Os01t0 -----
Os002917_Os01t0 -----
Os022977_Os05t0 HLKI-
Os009479_Os02t0 YHNFQ
Os022978_Os05t0 YLKYQ
Os022871_Os05t0 -----
BoxShade v3.31 C (beta, 970507) Output
AT4G39250.1     M A S S S - - - - - - - - M S S Q S S - - - - - G S W T A K Q N K A F E Q A L A T Y D Q D T P N R W Q N V A K V V - G G
Os002918_Os01t0    M A S - - - - - - - - - - M S V S S S R A - - - P Q W T A R Q N E Q F E R A L A V Y D R D T P E R W H N I A R A V - A G
Os002917_Os01t0    M A S S S K A - - - - - - - S S S S S A S A A S S E W T K Q Q N K Q F E R A L A V Y D T D A P D R W H N V A R Y M G G A
Os022977_Os05t0    M A - - - - - - - - - - - - - - Q Q A R A - - - - Q W P Q K Q N K L F E Q A L A V Y D K E T P D R W H N I A R A V G G G
Os009479_Os02t0    M S S - - - - - - - - - - - - - - - - - - - - - - S W T T K Q N K V F E R A L A I Y D R D T P D R W Q N V A R A V G G G
Os022978_Os05t0    M A S A A G S K Q Q Q A M M S L P S S R G G G G G G W T Q R Q N K Q F E C A L A V Y D K E T P D R W H N I A R Y M G G A
Os022871_Os05t0    M S G S R - - - - - - - - S S S P N S K S - - - - E W S R K E N K M F E E A L A Y Y G E D T P N R W D K V A S A M G G I
 
AT4G39250.1     K T T E E V K R H Y E L L V Q D I N S I E N - G H V P F P N - Y R T S - - - - - - - - - G G C T N G R L S Q E E K R M R
Os002918_Os01t0    K S A D E V K L Y Y D L L V E D V K R I E T - G K V P F P A - Y R C P - - - - - - - - - Q P A I A G - - - - - - - - - -
Os002917_Os01t0    K S A E E V R R H Y E R L Q A D V E Q I E A - G G V P F S L G Y G A - - - - - - - - - - T P Q A - - - - - - - G R R - -
Os022977_Os05t0    K S A E D V K R Y Y E M L E E D I K H I E S - G K V P F P A - Y R C - - - - - - - - - - - P A A A G Y - - Q - A E R L K
Os009479_Os02t0    K S V D D V K R H Y E K L I K D V D R I D S T G G H Q G S H - Y N S S N A S S S S S S S S S N S R G S - A N E D Q R R R
Os022978_Os05t0    K S A D E V R R H F D H L V E D V S R I E S - G R V P F P R - Y S S - - - - - - - - - - S S S S R G A - - D D G N R S R
Os022871_Os05t0    K S A E E I R C H Y E D L T D D V K T I E S - G R V Q F P K - Y K T - - - - - - - - - - - - - - Q G Y W T - - - - - - -
 
AT4G39250.1     N M R L Q
Os002918_Os01t0    - - - - -
Os002917_Os01t0    - - - - -
Os022977_Os05t0    H L K I -
Os009479_Os02t0    Y H N F Q
Os022978_Os05t0    Y L K Y Q
Os022871_Os05t0    - - - - -
 
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