fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G39250.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb033118 not found in 238aa AT1G75250.1 not_not 0.510752688 III
Sb019161 not found in 77aa AT1G75250.2 not_not 0.462365591 III
Sb010972 not found in 97aa AT1G75250.1 not_not 0.440860215 III
Sb030230 VTLSQGLQLKLVMHRS in 207/476 AT5G08520.1 not_not 0.440860215 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G39250.1     ------------------------------------------------MASSSMSSQSS-
Sb010972_Sorbi1 ---------------------------------------------------------MS-
Sb019161_Sorbi1 -----------------------------------------------QMASGGSSSSSS-
Sb030230_Sorbi1 ----HSSYLAAPPPLHFRSPPKPRNPTRGI--PRGRRLLRVHPPRGVSSGSASMAVEEAS
Sb033118_Sorbi1 FLLSHHYLQLQLGPLHACCPINPIYTHVCIFWIIDRSSYYVHH----LRRSSDVSACMS-
                                                                          : 

AT4G39250.1     ----------GSWTAKQNKAFEQALATY----DQDTPNRWQNVAKVVG-GKTTEEVKRHY
Sb010972_Sorbi1 ----------SSWTDSQNKLFERALAVY----DKDTPDRWHNIARAVGCGKTAEDVKRHY
Sb019161_Sorbi1 ----------RAWTQRQNKQFECALAVY----DRETPDRWHNIARYMGGTKSADEVRRHF
Sb030230_Sorbi1 SSGGGGEEGCGAWTREQEKAFENAVATTM-GGEEDGDARWEKLAEAVE-GKTPEEVRRHY
Sb033118_Sorbi1 ---GGPVAG-GAAVGREGHLAGLDVADVLLQQVVVAPDVLGGLAAADGAGDVVPPVRR--
                           : .  : :     :*                :*      .    *:*  

AT4G39250.1     ELLVQDINSIENGHVPFPNYRTS------------------GGCTNG-----RLSQEEKR
Sb010972_Sorbi1 RWLKRDVQQIESGE--------------GGQGSHSSNSSGSGSSSNS----CGRNNDDKR
Sb019161_Sorbi1 EQLVHDVTQIEAG-----------------------------------------------
Sb030230_Sorbi1 ELLVEDVDGIESGRVPLPTYAADGAAEEGGGGGGGGKKGGGGGGTHGDKGSAKSAEQERR
Sb033118_Sorbi1 -VLVVNGQRLLEQLVLL-----------------------------------RRPLRARR
                  *  :   :                                                  

AT4G39250.1     M----------------------------RN------------------MRLQ-------
Sb010972_Sorbi1 M----------------------------RH-----------------------------
Sb019161_Sorbi1 -----------------------------RV-----------------------------
Sb030230_Sorbi1 KGIAWTEDEHRLFLLGLEKYGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMNRERR
Sb033118_Sorbi1 CA---------------------------RH-------------------RLH-----RR
                                             *                              

AT4G39250.1     ------------------------------------------------------------
Sb010972_Sorbi1 ------------------------------------------------------------
Sb019161_Sorbi1 ------------------------------------------------------------
Sb030230_Sorbi1 RSSIHDITSVNNGDASTAQGPITGQTNGQAANPGKPSKQSPQPANTPPGVDAYGTTIGQP
Sb033118_Sorbi1 HS----------------------------------------------------------
                                                                            

AT4G39250.1     ---------------------------------------------------------
Sb010972_Sorbi1 ----------------------------------------------PKPQ-------
Sb019161_Sorbi1 ----------------------------------------------PFPR-------
Sb030230_Sorbi1 VGGPLVSAVGTPVTLPVSAPPHLAYGMHAPVPGAVVPGAPVNIAPMPYPMPPPSSHG
Sb033118_Sorbi1 ------------------------------------------VAFLELAREEGS---
BoxShade v3.31 C (beta, 970507) Output
AT4G39250.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A S S S M S S Q S S -
Sb010972_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S -
Sb019161_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Q M A S G G S S S S S S -
Sb030230_Sorbi1    - - - - H S S Y L A A P P P L H F R S P P K P R N P T R G I - - P R G R R L L R V H P P R G V S S G S A S M A V E E A S
Sb033118_Sorbi1    F L L S H H Y L Q L Q L G P L H A C C P I N P I Y T H V C I F W I I D R S S Y Y V H H - - - - L R R S S D V S A C M S -
 
AT4G39250.1     - - - - - - - - - - G S W T A K Q N K A F E Q A L A T Y - - - - D Q D T P N R W Q N V A K V V G - G K T T E E V K R H Y
Sb010972_Sorbi1    - - - - - - - - - - S S W T D S Q N K L F E R A L A V Y - - - - D K D T P D R W H N I A R A V G C G K T A E D V K R H Y
Sb019161_Sorbi1    - - - - - - - - - - R A W T Q R Q N K Q F E C A L A V Y - - - - D R E T P D R W H N I A R Y M G G T K S A D E V R R H F
Sb030230_Sorbi1    S S G G G G E E G C G A W T R E Q E K A F E N A V A T T M - G G E E D G D A R W E K L A E A V E - G K T P E E V R R H Y
Sb033118_Sorbi1    - - - G G P V A G - G A A V G R E G H L A G L D V A D V L L Q Q V V V A P D V L G G L A A A D G A G D V V P P V R R - -
 
AT4G39250.1     E L L V Q D I N S I E N G H V P F P N Y R T S - - - - - - - - - - - - - - - - - - G G C T N G - - - - - R L S Q E E K R
Sb010972_Sorbi1    R W L K R D V Q Q I E S G E - - - - - - - - - - - - - - G G Q G S H S S N S S G S G S S S N S - - - - C G R N N D D K R
Sb019161_Sorbi1    E Q L V H D V T Q I E A G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb030230_Sorbi1    E L L V E D V D G I E S G R V P L P T Y A A D G A A E E G G G G G G G G K K G G G G G G T H G D K G S A K S A E Q E R R
Sb033118_Sorbi1    - V L V V N G Q R L L E Q L V L L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - R R P L R A R R
 
AT4G39250.1     M - - - - - - - - - - - - - - - - - - - - - - - - - - - - R N - - - - - - - - - - - - - - - - - - M R L Q - - - - - - -
Sb010972_Sorbi1    M - - - - - - - - - - - - - - - - - - - - - - - - - - - - R H - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb019161_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - R V - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb030230_Sorbi1    K G I A W T E D E H R L F L L G L E K Y G K G D W R S I S R N F V I S R T P T Q V A S H A Q K Y F I R L N S M N R E R R
Sb033118_Sorbi1    C A - - - - - - - - - - - - - - - - - - - - - - - - - - - R H - - - - - - - - - - - - - - - - - - - R L H - - - - - R R
 
AT4G39250.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb010972_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb019161_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb030230_Sorbi1    R S S I H D I T S V N N G D A S T A Q G P I T G Q T N G Q A A N P G K P S K Q S P Q P A N T P P G V D A Y G T T I G Q P
Sb033118_Sorbi1    H S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT4G39250.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb010972_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - P K P Q - - - - - - -
Sb019161_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - P F P R - - - - - - -
Sb030230_Sorbi1    V G G P L V S A V G T P V T L P V S A P P H L A Y G M H A P V P G A V V P G A P V N I A P M P Y P M P P P S S H G
Sb033118_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - V A F L E L A R E E G S - - -
 
0