fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G39250.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm006862 EKRLRNLNLNLQ in 91/97 AT2G21650.1 1st_not 0.655913978 II
Gm016722 not found in 92aa AT4G39250.1 not_1st 0.612903225 II
Gm009735 not found in 92aa AT4G39250.1 not_1st 0.612903225 II
Gm032707 not found in 130aa AT4G39250.1 not_1st 0.612903225 II
Gm039275 not found in 97aa AT4G39250.1 not_1st 0.612903225 II
Gm001785 not found in 94aa AT4G39250.1 not_1st 0.526881720 II
Gm003139 not found in 73aa AT4G39250.1 not_1st 0.516129032 II
Gm030070 not found in 89aa AT4G39250.1 not_1st 0.5 II
Gm003138 not found in 73aa AT4G39250.1 not_1st 0.489247311 II
Gm044679 not found in 73aa AT4G39250.1 not_1st 0.483870967 II
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G39250.1     MASSSMSS--QSSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVG-GKTTEEVKRHYE
gm030070_Glyma1 MTTSTLSS-PDTSLRWTSEKNKLFENALAIYDKDTPERWNNIAMFVG-GTTEVQVKRQYE
gm001785_Glyma0 MTSYTLSS-PNTSLRWTTEKNKLFENALAIYDKDTPERWNNIAMFVG-GTTEVEVKRQYE
gm016722_Glyma0 MASSSMS----STGSWSAKDNKAFERALAVYDKDTPDRWYNVAKAVAVGKTPEEVKRHYE
gm003138_Glyma0 MA-----------SSWTPRQNKLFERALAKYDRETPDRWQNVANEV--GKSVEEVKRHYE
gm009735_Glyma0 MASSSMS----STGSWSTKDNKAFERALAVYDKDTPDRWYNVAKAVGGGKTPEEVKRHYE
gm044679_Glyma1 MA-----------SSWTPRQNKQFERALAKYDRETPDRWQNVANEV--GKSVEEVKRHYE
gm003139_Glyma0 MA-----------SSWTPRQNKLFEQALALYDRETPDRWQNVANVV--GRSVEDVKRHYE
gm039275_Glyma1 MA---------SSSAWTTKQNKKFENALAIYDRDTPDRWQNLARAVG-GKTVEEVKRHYE
gm032707_Glyma1 MASSSLSKQKASDSSWTPKQNKLFEKALAKYDKDTPDRWQNVAKAVG-GKSADEVKRHYE
gm006862_Glyma0 MASSSIS----ASGSWSVKDNKAFEKALAVYDKDTPDRWYNVAHAVG-GKTPEEVKRHYE
                *:             *: ..** **.*** **::**:** *:*  *  * :  :***:**

AT4G39250.1     LLVQDINSIENGHVPFPNYRT----SGGCTNGR-LSQEEKR-------------------
gm030070_Glyma1 ILLEDIKNIESGKVPLPAYTR----NAGCSKLN-IS------------------------
gm001785_Glyma0 ILLEDIKNIESGKVPLPDYTR----NAGCGKLN-ISSAEQR-------------------
gm016722_Glyma0 LLLRDVRHIESGQVPFP-YKQ----NGGS-------QEEKR-------------------
gm003138_Glyma0 ILKEDIRRIERGQVAFP-YRT----SNSNSN-----------------------------
gm009735_Glyma0 LLLRDVRYIESGKVPFP-YKQ----SGGS-------EEEKR-------------------
gm044679_Glyma1 ILKEDIRRIERGQVAFP-YRT----NNSNSN-----------------------------
gm003139_Glyma0 ILKEDVKRIEHGQVPFPRYKT----NTSNN------------------------------
gm039275_Glyma1 MLVDDLKQIEEGHVPLPNYRNAAATGGGSIRGYSYMDEEQR-------------------
gm032707_Glyma1 ILLEDLRHIESGHVPLPKYKS----TGSSTNV----EEEERKEKKRPLTKIIDTFFQFLN
gm006862_Glyma0 LLVQDVKHIESGRVPFPNYKK---TTSGST-----DQEEKR-------------------
                :*  *:. ** *:*.:* *        .                                

AT4G39250.1     -----MRNMRLQ-------
gm030070_Glyma1 -------------------
gm001785_Glyma0 -------------------
gm016722_Glyma0 -----LRNMKLQ-------
gm003138_Glyma0 -------------------
gm009735_Glyma0 -----LRNMKLQ-------
gm044679_Glyma1 -------------------
gm003139_Glyma0 -------------------
gm039275_Glyma1 -----LKSNFY--------
gm032707_Glyma1 VFTRHFQNSTLNYLVTYSI
gm006862_Glyma0 -----LRNLNLNLQ-----
BoxShade v3.31 C (beta, 970507) Output
AT4G39250.1     M A S S S M S S - - Q S S G S W T A K Q N K A F E Q A L A T Y D Q D T P N R W Q N V A K V V G - G K T T E E V K R H Y E
gm030070_Glyma1    M T T S T L S S - P D T S L R W T S E K N K L F E N A L A I Y D K D T P E R W N N I A M F V G - G T T E V Q V K R Q Y E
gm001785_Glyma0    M T S Y T L S S - P N T S L R W T T E K N K L F E N A L A I Y D K D T P E R W N N I A M F V G - G T T E V E V K R Q Y E
gm016722_Glyma0    M A S S S M S - - - - S T G S W S A K D N K A F E R A L A V Y D K D T P D R W Y N V A K A V A V G K T P E E V K R H Y E
gm003138_Glyma0    M A - - - - - - - - - - - S S W T P R Q N K L F E R A L A K Y D R E T P D R W Q N V A N E V - - G K S V E E V K R H Y E
gm009735_Glyma0    M A S S S M S - - - - S T G S W S T K D N K A F E R A L A V Y D K D T P D R W Y N V A K A V G G G K T P E E V K R H Y E
gm044679_Glyma1    M A - - - - - - - - - - - S S W T P R Q N K Q F E R A L A K Y D R E T P D R W Q N V A N E V - - G K S V E E V K R H Y E
gm003139_Glyma0    M A - - - - - - - - - - - S S W T P R Q N K L F E Q A L A L Y D R E T P D R W Q N V A N V V - - G R S V E D V K R H Y E
gm039275_Glyma1    M A - - - - - - - - - S S S A W T T K Q N K K F E N A L A I Y D R D T P D R W Q N L A R A V G - G K T V E E V K R H Y E
gm032707_Glyma1    M A S S S L S K Q K A S D S S W T P K Q N K L F E K A L A K Y D K D T P D R W Q N V A K A V G - G K S A D E V K R H Y E
gm006862_Glyma0    M A S S S I S - - - - A S G S W S V K D N K A F E K A L A V Y D K D T P D R W Y N V A H A V G - G K T P E E V K R H Y E
 
AT4G39250.1     L L V Q D I N S I E N G H V P F P N Y R T - - - - S G G C T N G R - L S Q E E K R - - - - - - - - - - - - - - - - - - -
gm030070_Glyma1    I L L E D I K N I E S G K V P L P A Y T R - - - - N A G C S K L N - I S - - - - - - - - - - - - - - - - - - - - - - - -
gm001785_Glyma0    I L L E D I K N I E S G K V P L P D Y T R - - - - N A G C G K L N - I S S A E Q R - - - - - - - - - - - - - - - - - - -
gm016722_Glyma0    L L L R D V R H I E S G Q V P F P - Y K Q - - - - N G G S - - - - - - - Q E E K R - - - - - - - - - - - - - - - - - - -
gm003138_Glyma0    I L K E D I R R I E R G Q V A F P - Y R T - - - - S N S N S N - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm009735_Glyma0    L L L R D V R Y I E S G K V P F P - Y K Q - - - - S G G S - - - - - - - E E E K R - - - - - - - - - - - - - - - - - - -
gm044679_Glyma1    I L K E D I R R I E R G Q V A F P - Y R T - - - - N N S N S N - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm003139_Glyma0    I L K E D V K R I E H G Q V P F P R Y K T - - - - N T S N N - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm039275_Glyma1    M L V D D L K Q I E E G H V P L P N Y R N A A A T G G G S I R G Y S Y M D E E Q R - - - - - - - - - - - - - - - - - - -
gm032707_Glyma1    I L L E D L R H I E S G H V P L P K Y K S - - - - T G S S T N V - - - - E E E E R K E K K R P L T K I I D T F F Q F L N
gm006862_Glyma0    L L V Q D V K H I E S G R V P F P N Y K K - - - T T S G S T - - - - - D Q E E K R - - - - - - - - - - - - - - - - - - -
 
AT4G39250.1     - - - - - M R N M R L Q - - - - - - -
gm030070_Glyma1    - - - - - - - - - - - - - - - - - - -
gm001785_Glyma0    - - - - - - - - - - - - - - - - - - -
gm016722_Glyma0    - - - - - L R N M K L Q - - - - - - -
gm003138_Glyma0    - - - - - - - - - - - - - - - - - - -
gm009735_Glyma0    - - - - - L R N M K L Q - - - - - - -
gm044679_Glyma1    - - - - - - - - - - - - - - - - - - -
gm003139_Glyma0    - - - - - - - - - - - - - - - - - - -
gm039275_Glyma1    - - - - - L K S N F Y - - - - - - - -
gm032707_Glyma1    V F T R H F Q N S T L N Y L V T Y S I
gm006862_Glyma0    - - - - - L R N L N L N L Q - - - - -
 
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