fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G39780.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm012800 not found in 312aa AT4G39780.1 not_1st 0.412526997 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G39780.1     -MAAIDMFNSNT------DPFQEELMKALQPY-------TTNTDSSSPTY------SNTV
gm012800_Glyma0 MGTAIGMYSNNNIVPDFLDPYSEELMKALMPFMKSDYFSASSSSSSRESHPSPLIPSNSL
                  :**.*:..*.      **:.******* *:       ::.:.**  ::      **::

AT4G39780.1     FGFNQTTSLGLNQLTPYQIHQIQNQLNQRRNIIS---PNLAPKPVPMKN----MTAQKLY
gm012800_Glyma0 PSSNQ---IRLNQLTQDQILQIQAQIHIQQQHVAQGQAHLGPKRVPMKHAGTAAKAAKLY
                 . **   : *****  ** *** *:: ::: ::   .:*.** ****:     .* ***

AT4G39780.1     RGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAAMAYDLAAYKLRGEFARLNFPQFRH
gm012800_Glyma0 RGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDNAAFKLRGEFARLNFPHLRH
                ************************************:*** **:************::**

AT4G39780.1     EDGY-YGGGSCFNPLHSSVDAKLQEICQSLRKTEDIDLPCSETELFPP------------
gm012800_Glyma0 HGAFVFGEFGDYRPLPSSVDSKLQAICESLAKQE--EKPCCSVEDVKPVIHAAELAEVES
                ...: :*  . :.** ****:*** **:** * *  : **...* . *            

AT4G39780.1     -----KTEYQESEY-GFLRSDENS-FSDESHVESSSPESGITTFLDFSD-----SGFDEI
gm012800_Glyma0 DVAKLNAEYVYPEFEDFKVENENPMLSSSVSGESSSPESGV-TFLDFSDFSDSNNQWDEM
                     ::**  .*: .*  .:**. :*..   ********: *******     . :**:

AT4G39780.1     GSFGLEKFPSVEIDWDAISKLSES
gm012800_Glyma0 ENFGLEKFPSVEIDWAAI------
                 .************* **
BoxShade v3.31 C (beta, 970507) Output
AT4G39780.1     - M A A I D M F N S N T - - - - - - D P F Q E E L M K A L Q P Y - - - - - - - T T N T D S S S P T Y - - - - - - S N T V
gm012800_Glyma0    M G T A I G M Y S N N N I V P D F L D P Y S E E L M K A L M P F M K S D Y F S A S S S S S S R E S H P S P L I P S N S L
 
AT4G39780.1     F G F N Q T T S L G L N Q L T P Y Q I H Q I Q N Q L N Q R R N I I S - - - P N L A P K P V P M K N - - - - M T A Q K L Y
gm012800_Glyma0    P S S N Q - - - I R L N Q L T Q D Q I L Q I Q A Q I H I Q Q Q H V A Q G Q A H L G P K R V P M K H A G T A A K A A K L Y
 
AT4G39780.1     R G V R Q R H W G K W V A E I R L P K N R T R L W L G T F D T A E E A A M A Y D L A A Y K L R G E F A R L N F P Q F R H
gm012800_Glyma0    R G V R Q R H W G K W V A E I R L P K N R T R L W L G T F D T A E E A A L A Y D N A A F K L R G E F A R L N F P H L R H
 
AT4G39780.1     E D G Y - Y G G G S C F N P L H S S V D A K L Q E I C Q S L R K T E D I D L P C S E T E L F P P - - - - - - - - - - - -
gm012800_Glyma0    H G A F V F G E F G D Y R P L P S S V D S K L Q A I C E S L A K Q E - - E K P C C S V E D V K P V I H A A E L A E V E S
 
AT4G39780.1     - - - - - K T E Y Q E S E Y - G F L R S D E N S - F S D E S H V E S S S P E S G I T T F L D F S D - - - - - S G F D E I
gm012800_Glyma0    D V A K L N A E Y V Y P E F E D F K V E N E N P M L S S S V S G E S S S P E S G V - T F L D F S D F S D S N N Q W D E M
 
AT4G39780.1     G S F G L E K F P S V E I D W D A I S K L S E S
gm012800_Glyma0    E N F G L E K F P S V E I D W A A I - - - - - -
 
0