fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G39780.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm021250 not found in 312aa AT4G39780.1 1st_1st 0.416846652 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G39780.1     -MAAIDMFNSNT------DPFQEELMKALQP-----YTTNTDSSSPTYSNTVFGFN----
gm021250_Glyma0 MGTAIDMYNSSNIVADFLDPYSEELMKALKPFMKSDYFSASSSSSLESQPCSFSSNSLPT
                  :****:**..      **:.*******:*     * : :.***   .   *. *    

AT4G39780.1     ---QTTSLGLNQLTPYQIHQIQNQLN---QRRNI--ISPNLAPKPVPMKNM-TA---QKL
gm021250_Glyma0 SYPSSNQIKLNQLTPDQIVQIQAQIHIQQQQQHVAQTQTHLGPKRVPMKHAGTAAKPTKL
                   .:..: ****** ** *** *::   *::::   ..:*.** ****:  **    **

AT4G39780.1     YRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAAMAYDLAAYKLRGEFARLNFPQFR
gm021250_Glyma0 YRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDNAAFKLRGEFARLNFPHLR
                *************************************:*** **:************::*

AT4G39780.1     HEDGY-YGGGSCFNPLHSSVDAKLQEICQSLRKTEDIDLPCSETELFPP-----------
gm021250_Glyma0 HHGAFVFGEFGDYKPLPSSVDSKLQAICESLAKQE--EKPCCSVEDVKPVIHAAELAEVE
                *...: :*  . ::** ****:*** **:** * *  : **...* . *           

AT4G39780.1     ------KTEYQESEY-GFLRSDENS-FSDESHVESSSPESGITTFLDFSD-----SGFDE
gm021250_Glyma0 SDVAKSNAEYVYPEFEDFKVEHENPMFSG----ESSSPESSV-TFLDFSDFSDSNNQWDE
                      ::**  .*: .*  ..**. **.    *******.: *******     . :**

AT4G39780.1     IGSFGLEKFPSVEIDWDAISKLSES
gm021250_Glyma0 MENFGLEKFPSVEIDWEAI------
                : .*************:**
BoxShade v3.31 C (beta, 970507) Output
AT4G39780.1     - M A A I D M F N S N T - - - - - - D P F Q E E L M K A L Q P - - - - - Y T T N T D S S S P T Y S N T V F G F N - - - -
gm021250_Glyma0    M G T A I D M Y N S S N I V A D F L D P Y S E E L M K A L K P F M K S D Y F S A S S S S S L E S Q P C S F S S N S L P T
 
AT4G39780.1     - - - Q T T S L G L N Q L T P Y Q I H Q I Q N Q L N - - - Q R R N I - - I S P N L A P K P V P M K N M - T A - - - Q K L
gm021250_Glyma0    S Y P S S N Q I K L N Q L T P D Q I V Q I Q A Q I H I Q Q Q Q Q H V A Q T Q T H L G P K R V P M K H A G T A A K P T K L
 
AT4G39780.1     Y R G V R Q R H W G K W V A E I R L P K N R T R L W L G T F D T A E E A A M A Y D L A A Y K L R G E F A R L N F P Q F R
gm021250_Glyma0    Y R G V R Q R H W G K W V A E I R L P K N R T R L W L G T F D T A E E A A L A Y D N A A F K L R G E F A R L N F P H L R
 
AT4G39780.1     H E D G Y - Y G G G S C F N P L H S S V D A K L Q E I C Q S L R K T E D I D L P C S E T E L F P P - - - - - - - - - - -
gm021250_Glyma0    H H G A F V F G E F G D Y K P L P S S V D S K L Q A I C E S L A K Q E - - E K P C C S V E D V K P V I H A A E L A E V E
 
AT4G39780.1     - - - - - - K T E Y Q E S E Y - G F L R S D E N S - F S D E S H V E S S S P E S G I T T F L D F S D - - - - - S G F D E
gm021250_Glyma0    S D V A K S N A E Y V Y P E F E D F K V E H E N P M F S G - - - - E S S S P E S S V - T F L D F S D F S D S N N Q W D E
 
AT4G39780.1     I G S F G L E K F P S V E I D W D A I S K L S E S
gm021250_Glyma0    M E N F G L E K F P S V E I D W E A I - - - - - -
 
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