fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G01200.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt044662 not found in 307aa AT2G38090.1 1st_not 0.515090543 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G01200.1     MSSSTMYRGVNMFSPA----NTNWIFQEVREATWTAEENKRFEKALAYLDDKDNLESWSK
pt044662_POPTR_ -----MNRGIGMLSPASYLQNSNWFFHESRGTKWTPEENKQFENALA-LYDKDTPDRWLK
                     * **:.*:***    *:**:*:* * :.**.****:**:*** * ***. : * *

AT5G01200.1     IADLIPGKTVADVIKRYKELEDDVSDIEAGLIPIPGYGGDASSAANSDYFFGLENSSYGY
pt044662_POPTR_ VAAMIPGKTVGDVIKQYRELEEDVSDIEAGLIPIPGY--------NSDCFTLEWVSNHGY
                :* :******.****:*:***:***************        *** *     *.:**

AT5G01200.1     D-----YVVGGKRSSPAMTDCFRSPMPEKERKKGVPWTEDEHLRFLMGLKKYGKGDWRNI
pt044662_POPTR_ EGLKQFYSPGGKRGTATRPS-------EQERKKGVPWTEEEHRQFLLGLQKYGKGDWRNI
                :     *  ****.:.: ..       *:**********:** :**:**:**********

AT5G01200.1     AKSFVTTRTPTQVASHAQKYFLRQLTDGKDKRRSSIHDITTVNIPDADASA---------
pt044662_POPTR_ SRNYVTTRTPTQVASHAQKYFIRQSTGGKDKRRSSIHDITTVNLPDARSPSPENRKPSSP
                ::.:*****************:** *.****************:*** :.:         

AT5G01200.1     --TATTADVALSP-----------------------TPAN------------SFDVFLQP
pt044662_POPTR_ DHSTTTKQSQASPITTGMVKGLFDWKPQNEGTATVFNPANGNLLMAPFCGISSYGSKLQE
                  ::** :   **                       .***            *:.  ** 

AT5G01200.1     N-------PHYSFASASASSYYNAFPQWS-----
pt044662_POPTR_ QNLLGGTLPGYQFGP------YNLIFQMQSMQHH
                :       * *.*..      ** : * .
BoxShade v3.31 C (beta, 970507) Output
AT5G01200.1     M S S S T M Y R G V N M F S P A - - - - N T N W I F Q E V R E A T W T A E E N K R F E K A L A Y L D D K D N L E S W S K
pt044662_POPTR_    - - - - - M N R G I G M L S P A S Y L Q N S N W F F H E S R G T K W T P E E N K Q F E N A L A - L Y D K D T P D R W L K
 
AT5G01200.1     I A D L I P G K T V A D V I K R Y K E L E D D V S D I E A G L I P I P G Y G G D A S S A A N S D Y F F G L E N S S Y G Y
pt044662_POPTR_    V A A M I P G K T V G D V I K Q Y R E L E E D V S D I E A G L I P I P G Y - - - - - - - - N S D C F T L E W V S N H G Y
 
AT5G01200.1     D - - - - - Y V V G G K R S S P A M T D C F R S P M P E K E R K K G V P W T E D E H L R F L M G L K K Y G K G D W R N I
pt044662_POPTR_    E G L K Q F Y S P G G K R G T A T R P S - - - - - - - E Q E R K K G V P W T E E E H R Q F L L G L Q K Y G K G D W R N I
 
AT5G01200.1     A K S F V T T R T P T Q V A S H A Q K Y F L R Q L T D G K D K R R S S I H D I T T V N I P D A D A S A - - - - - - - - -
pt044662_POPTR_    S R N Y V T T R T P T Q V A S H A Q K Y F I R Q S T G G K D K R R S S I H D I T T V N L P D A R S P S P E N R K P S S P
 
AT5G01200.1     - - T A T T A D V A L S P - - - - - - - - - - - - - - - - - - - - - - - T P A N - - - - - - - - - - - - S F D V F L Q P
pt044662_POPTR_    D H S T T T K Q S Q A S P I T T G M V K G L F D W K P Q N E G T A T V F N P A N G N L L M A P F C G I S S Y G S K L Q E
 
AT5G01200.1     N - - - - - - - P H Y S F A S A S A S S Y Y N A F P Q W S - - - - -
pt044662_POPTR_    Q N L L G G T L P G Y Q F G P - - - - - - Y N L I F Q M Q S M Q H H
 
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