fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G01200.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt006799 not found in 307aa AT2G38090.1 not_not 0.505030181 III
Pt029831 not found in 306aa AT2G38090.1 not_not 0.470824949 III
Pt020982 not found in 308aa AT5G58900.1 not_not 0.470824949 III
Pt035251 not found in 293aa AT2G38090.1 not_not 0.418511066 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G01200.1     MSSSTMYRGVNMFSPA----NTNWIFQEVREATWTAEENKRFEKALAYLDDKDNLESWSK
pt020982_POPTR_ -----MKWETEILSPGSYLSSSNWLAEESKNTKWTIAENKAFENALA-IYDKETSDRWHK
pt006799_POPTR_ -----MNRGIGILYPASYLQNSNWLFQEGEGTKWTPEENKQFENALA-LYDKDTPDRWLK
pt035251_POPTR_ ---------METLNPSWYMSNSNWFTQ---TTEWTREENKEFEIALA-IFDEHEPDRWLK
pt029831_POPTR_ -----MKWEMGILSPASYLSSTNWLLEESKNTKWTPAENKAFENALA-VYDEDTPDRWHK
                            : *.    .:**: :    : **  *** ** *** : *:.  : * *

AT5G01200.1     IADLIPGKTVADVIKRYKELEDDVSDIEAGLIPIPGYGGDASSAANSDYFFGLENSS-YG
pt020982_POPTR_ VAAMIPGKTVEDVIKQYKELELDVSYIEAGLIPVPGY-------SSSPFTLDWVNGNGYG
pt006799_POPTR_ VAALIPGKTVDDVIKQYRELEEDVCDIEAGLIPIPGY-------NSDSFTLEWVSNQ--G
pt035251_POPTR_ VAAMIPGKTVYDVIKQYKELEEDVSDIEAGRVPVPGY-------LSSSFTFQLVGNS--N
pt029831_POPTR_ VAAMIPGKTVGDVIKQYKELELDVSYIEAGLIPVPGY-------STSPFTLDWVDGN--G
                :* :****** ****:*:*** **. **** :*:***        .. : :   ...  .

AT5G01200.1     YD-----YVVGGKRSSPAMTDCFRSPMPEKERKKGVPWTEDEHLRFLMGLKKYGKGDWRN
pt020982_POPTR_ YDGFKQSYGLGGKRSSTGRP-------TDQERKKGVPWTEEEHKLFLMGLKKYGKGDWRN
pt006799_POPTR_ YDGLKQFYSPGGKRGTATRP-------SEQERKKGVPWTEEEHRQFLLGLQKYGKGDWRN
pt035251_POPTR_ FDAYR-------KRSLTAKS-------ADQQRKKGVPWTEDEHRRFLMGLLKHGKGDWRN
pt029831_POPTR_ YDGFKQSYGLGGKRSSTGRP-------ADQERKKGVPWTEEEHKLFLMGLKKYGKGDWRN
                :*          **. .  .       .:::*********:**  **:** *:*******

AT5G01200.1     IAKSFVTTRTPTQVASHAQKYFLR-QLTDGKDKRRSSIHDITTVNIPDADASATATTADV
pt020982_POPTR_ ISRNFVISRTPTQVASHAQKYFIR-QLSGGKDKRRASIHDITTVNLNETR----------
pt006799_POPTR_ ISRNYVTTRTPTQVASHAQKYFIR-QSTGGKDKRRSSIHDITTVNLPDAK----------
pt035251_POPTR_ ISRNFVVSKTPTQVASHAQKYFIRQQLSGVKDKRRPSIHDITTVNLADAT----------
pt029831_POPTR_ ISRNFVVSRTPTQVASHAQKYFIR-QLSGGKDKRRASIHDITTVNLNDAR----------
                *::.:* ::*************:* * :. *****.*********: ::           

AT5G01200.1     ALSPTPANSF-------DVFL----QPNPH-----------------YSFASAS----AS
pt020982_POPTR_ --TPSPDNKR-TSPDQSGAISQ---QPNSAAMPRTHFQWNQPNSGATMAFNSTNANMFMS
pt006799_POPTR_ --SPSPENKRLSSPDHSTTTMQSQAQPKTAGTVKGLFDWKQQNEGIATVYNPANDNL-LT
pt035251_POPTR_ --TPSDGDEP-SSLDQSDLLLS---QQKPAGMQKVLIDWDEAKDGSIMVFDSTHEDLFKS
pt029831_POPTR_ --TPSPDNKR-PSPDQPGAISQ---QPNSAAMPRTHFQWNQPNGGGTLAFNSTNANMFMS
                  :*:  :.                * :.                    : .:      :

AT5G01200.1     SYYNAFPQWS------------------------------------
pt020982_POPTR_ SPY-GINSYGLKMQGQNPHRGAVHDSYIGQQTMGFQMQSAQHYPHG
pt006799_POPTR_ TPFCGISSHGSKLQEQNLLGGTLPGYQFGPYNFIFQMQSMQHQ---
pt035251_POPTR_ SPY-EIPSNGLKFQGQNLCVGAHHGARINPHNMVFKLPPPRFQIQY
pt029831_POPTR_ APY-GISSYGLKMQGQNLPRGAVHDSYIRQQTMGFQMPSAHHYPHG
                : :  : . .
BoxShade v3.31 C (beta, 970507) Output
AT5G01200.1     M S S S T M Y R G V N M F S P A - - - - N T N W I F Q E V R E A T W T A E E N K R F E K A L A Y L D D K D N L E S W S K
pt020982_POPTR_    - - - - - M K W E T E I L S P G S Y L S S S N W L A E E S K N T K W T I A E N K A F E N A L A - I Y D K E T S D R W H K
pt006799_POPTR_    - - - - - M N R G I G I L Y P A S Y L Q N S N W L F Q E G E G T K W T P E E N K Q F E N A L A - L Y D K D T P D R W L K
pt035251_POPTR_    - - - - - - - - - M E T L N P S W Y M S N S N W F T Q - - - T T E W T R E E N K E F E I A L A - I F D E H E P D R W L K
pt029831_POPTR_    - - - - - M K W E M G I L S P A S Y L S S T N W L L E E S K N T K W T P A E N K A F E N A L A - V Y D E D T P D R W H K
 
AT5G01200.1     I A D L I P G K T V A D V I K R Y K E L E D D V S D I E A G L I P I P G Y G G D A S S A A N S D Y F F G L E N S S - Y G
pt020982_POPTR_    V A A M I P G K T V E D V I K Q Y K E L E L D V S Y I E A G L I P V P G Y - - - - - - - S S S P F T L D W V N G N G Y G
pt006799_POPTR_    V A A L I P G K T V D D V I K Q Y R E L E E D V C D I E A G L I P I P G Y - - - - - - - N S D S F T L E W V S N Q - - G
pt035251_POPTR_    V A A M I P G K T V Y D V I K Q Y K E L E E D V S D I E A G R V P V P G Y - - - - - - - L S S S F T F Q L V G N S - - N
pt029831_POPTR_    V A A M I P G K T V G D V I K Q Y K E L E L D V S Y I E A G L I P V P G Y - - - - - - - S T S P F T L D W V D G N - - G
 
AT5G01200.1     Y D - - - - - Y V V G G K R S S P A M T D C F R S P M P E K E R K K G V P W T E D E H L R F L M G L K K Y G K G D W R N
pt020982_POPTR_    Y D G F K Q S Y G L G G K R S S T G R P - - - - - - - T D Q E R K K G V P W T E E E H K L F L M G L K K Y G K G D W R N
pt006799_POPTR_    Y D G L K Q F Y S P G G K R G T A T R P - - - - - - - S E Q E R K K G V P W T E E E H R Q F L L G L Q K Y G K G D W R N
pt035251_POPTR_    F D A Y R - - - - - - - K R S L T A K S - - - - - - - A D Q Q R K K G V P W T E D E H R R F L M G L L K H G K G D W R N
pt029831_POPTR_    Y D G F K Q S Y G L G G K R S S T G R P - - - - - - - A D Q E R K K G V P W T E E E H K L F L M G L K K Y G K G D W R N
 
AT5G01200.1     I A K S F V T T R T P T Q V A S H A Q K Y F L R - Q L T D G K D K R R S S I H D I T T V N I P D A D A S A T A T T A D V
pt020982_POPTR_    I S R N F V I S R T P T Q V A S H A Q K Y F I R - Q L S G G K D K R R A S I H D I T T V N L N E T R - - - - - - - - - -
pt006799_POPTR_    I S R N Y V T T R T P T Q V A S H A Q K Y F I R - Q S T G G K D K R R S S I H D I T T V N L P D A K - - - - - - - - - -
pt035251_POPTR_    I S R N F V V S K T P T Q V A S H A Q K Y F I R Q Q L S G V K D K R R P S I H D I T T V N L A D A T - - - - - - - - - -
pt029831_POPTR_    I S R N F V V S R T P T Q V A S H A Q K Y F I R - Q L S G G K D K R R A S I H D I T T V N L N D A R - - - - - - - - - -
 
AT5G01200.1     A L S P T P A N S F - - - - - - - D V F L - - - - Q P N P H - - - - - - - - - - - - - - - - - Y S F A S A S - - - - A S
pt020982_POPTR_    - - T P S P D N K R - T S P D Q S G A I S Q - - - Q P N S A A M P R T H F Q W N Q P N S G A T M A F N S T N A N M F M S
pt006799_POPTR_    - - S P S P E N K R L S S P D H S T T T M Q S Q A Q P K T A G T V K G L F D W K Q Q N E G I A T V Y N P A N D N L - L T
pt035251_POPTR_    - - T P S D G D E P - S S L D Q S D L L L S - - - Q Q K P A G M Q K V L I D W D E A K D G S I M V F D S T H E D L F K S
pt029831_POPTR_    - - T P S P D N K R - P S P D Q P G A I S Q - - - Q P N S A A M P R T H F Q W N Q P N G G G T L A F N S T N A N M F M S
 
AT5G01200.1     S Y Y N A F P Q W S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt020982_POPTR_    S P Y - G I N S Y G L K M Q G Q N P H R G A V H D S Y I G Q Q T M G F Q M Q S A Q H Y P H G
pt006799_POPTR_    T P F C G I S S H G S K L Q E Q N L L G G T L P G Y Q F G P Y N F I F Q M Q S M Q H Q - - -
pt035251_POPTR_    S P Y - E I P S N G L K F Q G Q N L C V G A H H G A R I N P H N M V F K L P P P R F Q I Q Y
pt029831_POPTR_    A P Y - G I S S Y G L K M Q G Q N L P R G A V H D S Y I R Q Q T M G F Q M P S A H H Y P H G
 
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