fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G01200.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os021859 not found in 315aa AT5G58900.1 1st_not 0.432595573 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G01200.1     -MSSSTMYRGVNMFSPANTNWIFQEVREA-------------TWTAEENKRFEKALAYLD
Os021859_Os05t0 MMKESYM----EVLPPAPAHYFVGQAAAAGGWFLPDRRGGGGAWSQEENKVFEQALAALD
                 *..* *    :::.** ::::. :.  *             :*: **** **:*** **

AT5G01200.1     DKDNLESWSKIADLIPGKTVADVIKRYKELEDDVSDIEAGLIPIPGY---GGDASSAANS
Os021859_Os05t0 RNDP-ERWERVALLLPGKTVADVMTHYDDLENDVCFIEAGLVPFPHYGAAGGGGGSGFTL
                 :*  * *.::* *:********:.:*.:**:**. *****:*:* *   **...*. . 

AT5G01200.1     DYFFGLENSSYGYD---YVVGGKRSSPAMTDCFRSPMPEKERKKGVPWTEDEHLRFLMGL
Os021859_Os05t0 DWDGGDDPAGLGFKRSCYMVGGKRARG----------PDQERKKGVPWTEEEHKLFLMGL
                *:  * : :. *:.   *:*****:            *::**********:**  *****

AT5G01200.1     KKYGKGDWRNIAKSFVTTRTPTQVASHAQKYFLRQLTDGKDKRRSSIHDITTVNIPDAD-
Os021859_Os05t0 KKYGRGDWRNISRNFVTSRTPTQVASHAQKYFIRLNSGGKDKRRSSIHDITTVNLPDDDH
                ****:******::.***:**************:*  :.****************:** * 

AT5G01200.1     -----------ASATATTADVALSPTPANSFDVFLQ------------------PNPHYS
Os021859_Os05t0 GNPSPSPPPSVLTAHSSSSAAAVS----EQFGVLVDGKPPPPPLGRGAGHHHFMPHPYAQ
                            :* :::: .*:*    :.*.*:::                  *:*: .

AT5G01200.1     FASASASSYY--------NAFPQWS---------
Os021859_Os05t0 VKIEAGNSHVAGGGRLDDSVLVQMQCGQLMQPLG
                .   :..*:         ..: * .
BoxShade v3.31 C (beta, 970507) Output
AT5G01200.1     - M S S S T M Y R G V N M F S P A N T N W I F Q E V R E A - - - - - - - - - - - - - T W T A E E N K R F E K A L A Y L D
Os021859_Os05t0    M M K E S Y M - - - - E V L P P A P A H Y F V G Q A A A A G G W F L P D R R G G G G A W S Q E E N K V F E Q A L A A L D
 
AT5G01200.1     D K D N L E S W S K I A D L I P G K T V A D V I K R Y K E L E D D V S D I E A G L I P I P G Y - - - G G D A S S A A N S
Os021859_Os05t0    R N D P - E R W E R V A L L L P G K T V A D V M T H Y D D L E N D V C F I E A G L V P F P H Y G A A G G G G G S G F T L
 
AT5G01200.1     D Y F F G L E N S S Y G Y D - - - Y V V G G K R S S P A M T D C F R S P M P E K E R K K G V P W T E D E H L R F L M G L
Os021859_Os05t0    D W D G G D D P A G L G F K R S C Y M V G G K R A R G - - - - - - - - - - P D Q E R K K G V P W T E E E H K L F L M G L
 
AT5G01200.1     K K Y G K G D W R N I A K S F V T T R T P T Q V A S H A Q K Y F L R Q L T D G K D K R R S S I H D I T T V N I P D A D -
Os021859_Os05t0    K K Y G R G D W R N I S R N F V T S R T P T Q V A S H A Q K Y F I R L N S G G K D K R R S S I H D I T T V N L P D D D H
 
AT5G01200.1     - - - - - - - - - - - A S A T A T T A D V A L S P T P A N S F D V F L Q - - - - - - - - - - - - - - - - - - P N P H Y S
Os021859_Os05t0    G N P S P S P P P S V L T A H S S S S A A A V S - - - - E Q F G V L V D G K P P P P P L G R G A G H H H F M P H P Y A Q
 
AT5G01200.1     F A S A S A S S Y Y - - - - - - - - N A F P Q W S - - - - - - - - -
Os021859_Os05t0    V K I E A G N S H V A G G G R L D D S V L V Q M Q C G Q L M Q P L G
 
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