fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G01200.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os004753 not found in 299aa AT2G38090.1 not_not 0.422535211 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G01200.1     MSSSTMYRGVNM-FSPANTNWIFQEVREA-TWTAEENKRFEKALAYLDDKDNLESWSKIA
Os004753_Os01t0 MMAEALREVLPLPYFPGQPCWYLQERRGAEAWSAEENKVFERALAQV-DLDSPNRWEMVA
                * :.:: . : : : *.:. * :** * * :*:***** **:*** : * *. : *. :*

AT5G01200.1     DLIPGKTVADVIKRYKELEDDVSDIEAGLIPIPGYGGDASSAANSDYFFGLENSSYGYDY
Os004753_Os01t0 AMLPRKTVIDVMNHYRDLENDVGSIEAGLVPFPHYSSSLSPASSG---FTLQD----WDG
                 ::* *** **:::*::**:**..*****:*:* *... *.*:..   * *::    :* 

AT5G01200.1     VVGGKRSSPAMTDCF--RSPMPEKERKKGVPWTEDEHLRFLMGLKKYGKGDWRNIAKSFV
Os004753_Os01t0 SDGGFRRG-----CYLKRGRAPDQERKKGVPWTEEEHKSFLMGLKKYGRGDWRNISRYFV
                  ** * .     *:  *.  *::**********:**  *********:******:: **

AT5G01200.1     TTRTPTQVASHAQKYFLRQLTDGKDKRRSSIHDITTVNIPDADAS-------ATATTADV
Os004753_Os01t0 TSRTPTQVASHAQKYFIRLNSGGKDKRRSSIHDITTVNLPEEDTSNPSPSPPSVLTTASD
                *:**************:*  :.****************:*: *:*       :. ***. 

AT5G01200.1     AL----------------------SPTPAN-------SFDVFLQPNPHYSFASASASSYY
Os004753_Os01t0 QLGSLVDTKPVPPPPSLGAQRHFMSPLPGALGVSHHPYGNVKLEPNASFLAGGGTGPGLD
                 *                      ** *.          :* *:**. :  ...:...  

AT5G01200.1     NA-FPQWS----
Os004753_Os01t0 DAILLQMQCGHL
                :* : * .
BoxShade v3.31 C (beta, 970507) Output
AT5G01200.1     M S S S T M Y R G V N M - F S P A N T N W I F Q E V R E A - T W T A E E N K R F E K A L A Y L D D K D N L E S W S K I A
Os004753_Os01t0    M M A E A L R E V L P L P Y F P G Q P C W Y L Q E R R G A E A W S A E E N K V F E R A L A Q V - D L D S P N R W E M V A
 
AT5G01200.1     D L I P G K T V A D V I K R Y K E L E D D V S D I E A G L I P I P G Y G G D A S S A A N S D Y F F G L E N S S Y G Y D Y
Os004753_Os01t0    A M L P R K T V I D V M N H Y R D L E N D V G S I E A G L V P F P H Y S S S L S P A S S G - - - F T L Q D - - - - W D G
 
AT5G01200.1     V V G G K R S S P A M T D C F - - R S P M P E K E R K K G V P W T E D E H L R F L M G L K K Y G K G D W R N I A K S F V
Os004753_Os01t0    S D G G F R R G - - - - - C Y L K R G R A P D Q E R K K G V P W T E E E H K S F L M G L K K Y G R G D W R N I S R Y F V
 
AT5G01200.1     T T R T P T Q V A S H A Q K Y F L R Q L T D G K D K R R S S I H D I T T V N I P D A D A S - - - - - - - A T A T T A D V
Os004753_Os01t0    T S R T P T Q V A S H A Q K Y F I R L N S G G K D K R R S S I H D I T T V N L P E E D T S N P S P S P P S V L T T A S D
 
AT5G01200.1     A L - - - - - - - - - - - - - - - - - - - - - - S P T P A N - - - - - - - S F D V F L Q P N P H Y S F A S A S A S S Y Y
Os004753_Os01t0    Q L G S L V D T K P V P P P P S L G A Q R H F M S P L P G A L G V S H H P Y G N V K L E P N A S F L A G G G T G P G L D
 
AT5G01200.1     N A - F P Q W S - - - -
Os004753_Os01t0    D A I L L Q M Q C G H L
 
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