fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G01200.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os021859 not found in 315aa AT5G58900.1 1st_not 0.432595573 II
Os004753 not found in 299aa AT2G38090.1 not_not 0.422535211 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G01200.1     -MSSSTMYRGVNMFS-PANT-----------NWIFQEVR--EATWTAEENKRFEKALAYL
Os021859_Os05t0 MMKESYM----EVLP-PAPAHYFVGQAAAAGGWFLPDRRGGGGAWSQEENKVFEQALAAL
Os004753_Os01t0 MMAEALR----EVLPLP----YFPGQPC----WYLQERR-GAEAWSAEENKVFERALAQV
                 * .:      :::. *               * : : *    :*: **** **:*** :

AT5G01200.1     DDKDNLESWSKIADLIPGKTVADVIKRYKELEDDVSDIEAGLIPIPGYGGDASSAANS--
Os021859_Os05t0 -DRNDPERWERVALLLPGKTVADVMTHYDDLENDVCFIEAGLVPFPHYGAAGGGGGSGFT
Os004753_Os01t0 -DLDSPNRWEMVAAMLPRKTVIDVMNHYRDLENDVGSIEAGLVPFPHYSSSLSPASSGFT
                 * :. : *. :* ::* *** **:.:* :**:**  *****:*:* *..  . ....  

AT5G01200.1     --DYFFGLENSSYGYD---YVVGGKRSSPAMTDCFRSPMPEKERKKGVPWTEDEHLRFLM
Os021859_Os05t0 L-DWDGGDDPAGLGFKRSCYMVGGKRARG----------PDQERKKGVPWTEEEHKLFLM
Os004753_Os01t0 LQDWDGSDG----GFRRGCYL---KRGRA----------PDQERKKGVPWTEEEHKSFLM
                  *:  .      *:    *:   **.            *::**********:**  ***

AT5G01200.1     GLKKYGKGDWRNIAKSFVTTRTPTQVASHAQKYFLRQLTDGKDKRRSSIHDITTVNIPDA
Os021859_Os05t0 GLKKYGRGDWRNISRNFVTSRTPTQVASHAQKYFIRLNSGGKDKRRSSIHDITTVNLPDD
Os004753_Os01t0 GLKKYGRGDWRNISRYFVTSRTPTQVASHAQKYFIRLNSGGKDKRRSSIHDITTVNLPEE
                ******:******:: ***:**************:*  :.****************:*: 

AT5G01200.1     DASATATT-ADVALS-------PTPANSFDV------------------FLQP-------
Os021859_Os05t0 DHGNPSPSPPPSVLTAHSSSSAAAVSEQFGVLVDGKPPPPPLGRGAGHHHFMP-------
Os004753_Os01t0 DTSNPSPS-PPSVLT--------TASDQLGSLVDTKPVPPPPSLGAQRHFMSPLPGALGV
                * . .:.: .  .*:        : ::.:.                   .: *       

AT5G01200.1     --NPHYSFASASASSYY-----------NAFPQWS---------
Os021859_Os05t0 --HPYAQVKIEAGNSHVAGGGR---LDDSVLVQMQCGQLMQPLG
Os004753_Os01t0 SHHPYGNVKLEPNASFLAGGGTGPGLDDAILLQMQCGHL-----
                  :*: ..   .  *.              : * .
BoxShade v3.31 C (beta, 970507) Output
AT5G01200.1     - M S S S T M Y R G V N M F S - P A N T - - - - - - - - - - - N W I F Q E V R - - E A T W T A E E N K R F E K A L A Y L
Os021859_Os05t0    M M K E S Y M - - - - E V L P - P A P A H Y F V G Q A A A A G G W F L P D R R G G G G A W S Q E E N K V F E Q A L A A L
Os004753_Os01t0    M M A E A L R - - - - E V L P L P - - - - Y F P G Q P C - - - - W Y L Q E R R - G A E A W S A E E N K V F E R A L A Q V
 
AT5G01200.1     D D K D N L E S W S K I A D L I P G K T V A D V I K R Y K E L E D D V S D I E A G L I P I P G Y G G D A S S A A N S - -
Os021859_Os05t0    - D R N D P E R W E R V A L L L P G K T V A D V M T H Y D D L E N D V C F I E A G L V P F P H Y G A A G G G G G S G F T
Os004753_Os01t0    - D L D S P N R W E M V A A M L P R K T V I D V M N H Y R D L E N D V G S I E A G L V P F P H Y S S S L S P A S S G F T
 
AT5G01200.1     - - D Y F F G L E N S S Y G Y D - - - Y V V G G K R S S P A M T D C F R S P M P E K E R K K G V P W T E D E H L R F L M
Os021859_Os05t0    L - D W D G G D D P A G L G F K R S C Y M V G G K R A R G - - - - - - - - - - P D Q E R K K G V P W T E E E H K L F L M
Os004753_Os01t0    L Q D W D G S D G - - - - G F R R G C Y L - - - K R G R A - - - - - - - - - - P D Q E R K K G V P W T E E E H K S F L M
 
AT5G01200.1     G L K K Y G K G D W R N I A K S F V T T R T P T Q V A S H A Q K Y F L R Q L T D G K D K R R S S I H D I T T V N I P D A
Os021859_Os05t0    G L K K Y G R G D W R N I S R N F V T S R T P T Q V A S H A Q K Y F I R L N S G G K D K R R S S I H D I T T V N L P D D
Os004753_Os01t0    G L K K Y G R G D W R N I S R Y F V T S R T P T Q V A S H A Q K Y F I R L N S G G K D K R R S S I H D I T T V N L P E E
 
AT5G01200.1     D A S A T A T T - A D V A L S - - - - - - - P T P A N S F D V - - - - - - - - - - - - - - - - - - F L Q P - - - - - - -
Os021859_Os05t0    D H G N P S P S P P P S V L T A H S S S S A A A V S E Q F G V L V D G K P P P P P L G R G A G H H H F M P - - - - - - -
Os004753_Os01t0    D T S N P S P S - P P S V L T - - - - - - - - T A S D Q L G S L V D T K P V P P P P S L G A Q R H F M S P L P G A L G V
 
AT5G01200.1     - - N P H Y S F A S A S A S S Y Y - - - - - - - - - - - N A F P Q W S - - - - - - - - -
Os021859_Os05t0    - - H P Y A Q V K I E A G N S H V A G G G R - - - L D D S V L V Q M Q C G Q L M Q P L G
Os004753_Os01t0    S H H P Y G N V K L E P N A S F L A G G G T G P G L D D A I L L Q M Q C G H L - - - - -
 
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