fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G01200.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb032690 not found in 539aa AT5G58900.1 1st_not 0.428571428 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G01200.1     MSSSTMYRGVNMFSPANTNWIFQEVREATW---TAEENKRFEKALAYLDDKDN-------
Sb032690_Sorbi1 LKPTTDTR--NRLVRGQRREVFSSFCHCNFCVKTSQSAERLQLAAVHLHLHQNRVVQEAS
                :..:*  *  * :  .: . :*... ...:   *::. :*:: * .:*. ::*       

AT5G01200.1     --------LESWSKIADLIPGKTVADVIKRY--------KELEDDVSDIEAGLIPIPGYG
Sb032690_Sorbi1 TVMGIDAGLELHVAVGGVRQEVVVVVVVRRRGLAVDEDAKLLGDDRAAAGGGGRGCGGGG
                        **    :..:    .*. *::*         * * ** :   .*     * *

AT5G01200.1     GDASS--------AANSDYFFGLENSSYGYD------------------YVVGGKRSSPA
Sb032690_Sorbi1 GEHRHRGRRGRGVAAACGVVVGEVDGGDVVDAGAALVLAAGVEADEVLLRVAGHLRRRPA
                *:           ** .. ..*  :..   *                   *.*  *  **

AT5G01200.1     MTDCFRSPMPEKERKKGVP-----WTEDEHLRFLM-------------------------
Sb032690_Sorbi1 SHEVARDVPP-------VPAPVLLQTHQEQLVLLLRPGDALLALLVRPTALALAAANHVA
                  :  *.  *       **      *.:*:* :*:                         

AT5G01200.1     -------------------GLKK-------YGKG-----DWRNIAKSFVTT------RTP
Sb032690_Sorbi1 GALKASVAGAGIPVEREPSGLRRATAAAAVAGEGHESGLDEADIALEVIVVGDDVGHRPP
                                   **::        *:*     *  :** ..:..      *.*

AT5G01200.1     TQVASHAQKYFLRQLTD--------GKDKRRSSIHDITTVNIP------------DADAS
Sb032690_Sorbi1 RQ-----------QLGDPLPPIRRVGVDPRQRALEHLVLLHRPRPGPGPPVRRRRQEPPA
                 *           ** *        * * *: ::..:. :: *            :  .:

AT5G01200.1     ATATTADVA----LSPT---P-ANSFDVFLQPNPHYS-------------FASASASSYY
Sb032690_Sorbi1 ARRLSREVGRRQHLHPQLRHPRTNRPPRFLSPSLSLSESEDTDTEEGGETLVSQSARREG
                *   : :*.    * *    * :*    **.*.   *             :.* **    

AT5G01200.1     NAFPQWS
Sb032690_Sorbi1 -------
BoxShade v3.31 C (beta, 970507) Output
AT5G01200.1     M S S S T M Y R G V N M F S P A N T N W I F Q E V R E A T W - - - T A E E N K R F E K A L A Y L D D K D N - - - - - - -
Sb032690_Sorbi1    L K P T T D T R - - N R L V R G Q R R E V F S S F C H C N F C V K T S Q S A E R L Q L A A V H L H L H Q N R V V Q E A S
 
AT5G01200.1     - - - - - - - - L E S W S K I A D L I P G K T V A D V I K R Y - - - - - - - - K E L E D D V S D I E A G L I P I P G Y G
Sb032690_Sorbi1    T V M G I D A G L E L H V A V G G V R Q E V V V V V V V R R R G L A V D E D A K L L G D D R A A A G G G G R G C G G G G
 
AT5G01200.1     G D A S S - - - - - - - - A A N S D Y F F G L E N S S Y G Y D - - - - - - - - - - - - - - - - - - Y V V G G K R S S P A
Sb032690_Sorbi1    G E H R H R G R R G R G V A A A C G V V V G E V D G G D V V D A G A A L V L A A G V E A D E V L L R V A G H L R R R P A
 
AT5G01200.1     M T D C F R S P M P E K E R K K G V P - - - - - W T E D E H L R F L M - - - - - - - - - - - - - - - - - - - - - - - - -
Sb032690_Sorbi1    S H E V A R D V P P - - - - - - - V P A P V L L Q T H Q E Q L V L L L R P G D A L L A L L V R P T A L A L A A A N H V A
 
AT5G01200.1     - - - - - - - - - - - - - - - - - - - G L K K - - - - - - - Y G K G - - - - - D W R N I A K S F V T T - - - - - - R T P
Sb032690_Sorbi1    G A L K A S V A G A G I P V E R E P S G L R R A T A A A A V A G E G H E S G L D E A D I A L E V I V V G D D V G H R P P
 
AT5G01200.1     T Q V A S H A Q K Y F L R Q L T D - - - - - - - - G K D K R R S S I H D I T T V N I P - - - - - - - - - - - - D A D A S
Sb032690_Sorbi1    R Q - - - - - - - - - - - Q L G D P L P P I R R V G V D P R Q R A L E H L V L L H R P R P G P G P P V R R R R Q E P P A
 
AT5G01200.1     A T A T T A D V A - - - - L S P T - - - P - A N S F D V F L Q P N P H Y S - - - - - - - - - - - - - F A S A S A S S Y Y
Sb032690_Sorbi1    A R R L S R E V G R R Q H L H P Q L R H P R T N R P P R F L S P S L S L S E S E D T D T E E G G E T L V S Q S A R R E G
 
AT5G01200.1     N A F P Q W S
Sb032690_Sorbi1    - - - - - - -
 
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