fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G01200.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb026128 not found in 378aa AT5G58900.1 not_not 0.410462776 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G01200.1     MSSSTMYRGVN-----------------------MFSPA-------NTNWIFQEVREATW
Sb026128_Sorbi1 FSPSSFFAASQTAPAQVGRHAAAKMMAEAAWTPVLFPPTVPCFWQPDTHPVFWR-RGDAW
                :*.*::: . :                       :*.*:       :*: :* . *  :*

AT5G01200.1     TAEENKRFEKALAYLDDKDNLESWSKIADLIPGKTVADVIKRYKELEDDVSDIEAGLIPI
Sb026128_Sorbi1 TAEENKKFEKALA-LIDRNAPDRWEKVAELLPRKTADDVRNHYHDLENDVGYIEAGLVPF
                ******:****** * *::  : *.*:*:*:* **. ** ::*::**:**. *****:*:

AT5G01200.1     PGYGGDASSAANSDYFFGLEN-SSYGYDYVVGG----KRSSPAMTDCFRSPMPEKERKKG
Sb026128_Sorbi1 PHYSSSVPSSG-----FTLEDWDAYG-----GGGGGFRRGGYCLK---RSRGSDQERKKG
                * *.....*:.     * **: .:**     **    :*.. .:.   **  .::*****

AT5G01200.1     VPWTEDEHLRFLMGLKKYGKGDWRNIAKSFVTTRTPTQVASHAQKYFLRQLTDGKDKRRS
Sb026128_Sorbi1 VPWTEEEHKLFLMGLKKYGRGDWRNISRKYVTTRTPTQVASHAQKYFIRLNSGGKDKRRS
                *****:**  *********:******::.:*****************:*  :.*******

AT5G01200.1     SIHDITTVNIPDAD-ASAT---ATTADVALSPTPANSFDV--FLQPNPHYSFASASASSY
Sb026128_Sorbi1 SIHDITTVNLPDEDRGNATPPSPPSAVTAANPSVAALVDVKPFMAPR----MKSGTVSAF
                *********:** * ..**   ..:* .* .*: *  .**  *: *.    : *.:.*::

AT5G01200.1     YNAFPQWS--
Sb026128_Sorbi1 SCPSPRGSSE
                  . *: *
BoxShade v3.31 C (beta, 970507) Output
AT5G01200.1     M S S S T M Y R G V N - - - - - - - - - - - - - - - - - - - - - - - M F S P A - - - - - - - N T N W I F Q E V R E A T W
Sb026128_Sorbi1    F S P S S F F A A S Q T A P A Q V G R H A A A K M M A E A A W T P V L F P P T V P C F W Q P D T H P V F W R - R G D A W
 
AT5G01200.1     T A E E N K R F E K A L A Y L D D K D N L E S W S K I A D L I P G K T V A D V I K R Y K E L E D D V S D I E A G L I P I
Sb026128_Sorbi1    T A E E N K K F E K A L A - L I D R N A P D R W E K V A E L L P R K T A D D V R N H Y H D L E N D V G Y I E A G L V P F
 
AT5G01200.1     P G Y G G D A S S A A N S D Y F F G L E N - S S Y G Y D Y V V G G - - - - K R S S P A M T D C F R S P M P E K E R K K G
Sb026128_Sorbi1    P H Y S S S V P S S G - - - - - F T L E D W D A Y G - - - - - G G G G G F R R G G Y C L K - - - R S R G S D Q E R K K G
 
AT5G01200.1     V P W T E D E H L R F L M G L K K Y G K G D W R N I A K S F V T T R T P T Q V A S H A Q K Y F L R Q L T D G K D K R R S
Sb026128_Sorbi1    V P W T E E E H K L F L M G L K K Y G R G D W R N I S R K Y V T T R T P T Q V A S H A Q K Y F I R L N S G G K D K R R S
 
AT5G01200.1     S I H D I T T V N I P D A D - A S A T - - - A T T A D V A L S P T P A N S F D V - - F L Q P N P H Y S F A S A S A S S Y
Sb026128_Sorbi1    S I H D I T T V N L P D E D R G N A T P P S P P S A V T A A N P S V A A L V D V K P F M A P R - - - - M K S G T V S A F
 
AT5G01200.1     Y N A F P Q W S - -
Sb026128_Sorbi1    S C P S P R G S S E
 
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