fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G02460.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb000154 not found in 435aa AT5G02460.1 1st_1st 0.303501945 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G02460.1     MVFSSFPTYPDHSSNW---QQQHQPITTTV---------------GFTGNNINQQFLPHH
Sb000154_Sorbi1 MVFSSVPVYLD-PPNWNQHQHQHQPQQQQQQAHHGQLPSGGAGGGGGGGMEAHAHHHHHH
                *****.*.* * ..**   *:****                    *  * : : :.  **

AT5G02460.1     PLPPQQQQTPPQLHHNNG---------------NGGVAVPGGPGG------LIRPGSMAE
Sb000154_Sorbi1 QLPP----VPPP----GGALMAPRPDMAAVVAASGGGSTPGAGGGPTAGGSAIRPGSMTE
                 ***    .**     .*               .** :.**. **       ******:*

AT5G02460.1     RARLANIPLPETALKCPRCDSTNTKFCYFNNYSLTQPRHFCKACRRYWTRGGALRSVPVG
Sb000154_Sorbi1 RARLAKIPQPEPGLKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVG
                *****:** **..******:**************:*******:************.****

AT5G02460.1     GGCRRNKRTKNSSGGGGGSTSSGNSKSQDSATSNDQYHHRAMANNQMGPPSSSSSLSSLL
Sb000154_Sorbi1 GGCRRNKRTKSSKSNSSSAASASGAGGTSSSTS-----------------STATGGSSAG
                **********.*......::*:..: . .*:**                 *:::. **  

AT5G02460.1     SSYNAGLIPGH-------------------DHNSNNNNILGLGSSLPPLKLMPPLDFTDN
Sb000154_Sorbi1 GASGAGIMPSHQGHGHLPFLASLHHPLAGGDHYSTGASRLG----FPGLSSLDPVD----
                .: .**::*.*                   ** *.. . **    :* *. : *:*    

AT5G02460.1     FTLQYGAVSAPSYHIGGGSSG-GAAALLNGFDQWRFPA-TNQLP------------LGGL
Sb000154_Sorbi1 ------------YHQFGASAGAGGAAL--GLEQWRLPQIQHQFPFLSGRPDAVPPTMSGI
                            **  *.*:* *.***  *::***:*   :*:*            :.*:

AT5G02460.1     DPFDQQHQMEQQNPGYGLVTGSGQYRPKNIF--HNLISSSSSASSAMVTATASQLASVKM
Sb000154_Sorbi1 YPFDVE--------GHG-GDGTG-------FAGHMLGASKVPGSAGLIT----QLASVKM
                 *** :        *:*   *:*       *  * * :*. ..*:.::*    *******

AT5G02460.1     EDSNNQLNLS----RQLFG--DEQQLW-----------NIHGAAAA-------------S
Sb000154_Sorbi1 EDNPASAAMANSSPREFLGLPGNLQFWGGGSNGGANGNNGGGAGNAGGGGSGGGGGGGGG
                **.  .  ::    *:::*  .: *:*           *  **. *             .

AT5G02460.1     TAAATSSWSEVSNNFSSSSTSNI-
Sb000154_Sorbi1 TVAPGSSWVDLS-GFNSSSSGNVL
                *.*. *** ::* .*.***:.*:
BoxShade v3.31 C (beta, 970507) Output
AT5G02460.1     M V F S S F P T Y P D H S S N W - - - Q Q Q H Q P I T T T V - - - - - - - - - - - - - - - G F T G N N I N Q Q F L P H H
Sb000154_Sorbi1    M V F S S V P V Y L D - P P N W N Q H Q H Q H Q P Q Q Q Q Q Q A H H G Q L P S G G A G G G G G G G M E A H A H H H H H H
 
AT5G02460.1     P L P P Q Q Q Q T P P Q L H H N N G - - - - - - - - - - - - - - - N G G V A V P G G P G G - - - - - - L I R P G S M A E
Sb000154_Sorbi1    Q L P P - - - - V P P P - - - - G G A L M A P R P D M A A V V A A S G G G S T P G A G G G P T A G G S A I R P G S M T E
 
AT5G02460.1     R A R L A N I P L P E T A L K C P R C D S T N T K F C Y F N N Y S L T Q P R H F C K A C R R Y W T R G G A L R S V P V G
Sb000154_Sorbi1    R A R L A K I P Q P E P G L K C P R C E S T N T K F C Y F N N Y S L S Q P R H F C K T C R R Y W T R G G A L R N V P V G
 
AT5G02460.1     G G C R R N K R T K N S S G G G G G S T S S G N S K S Q D S A T S N D Q Y H H R A M A N N Q M G P P S S S S S L S S L L
Sb000154_Sorbi1    G G C R R N K R T K S S K S N S S S A A S A S G A G G T S S S T S - - - - - - - - - - - - - - - - - S T A T G G S S A G
 
AT5G02460.1     S S Y N A G L I P G H - - - - - - - - - - - - - - - - - - - D H N S N N N N I L G L G S S L P P L K L M P P L D F T D N
Sb000154_Sorbi1    G A S G A G I M P S H Q G H G H L P F L A S L H H P L A G G D H Y S T G A S R L G - - - - F P G L S S L D P V D - - - -
 
AT5G02460.1     F T L Q Y G A V S A P S Y H I G G G S S G - G A A A L L N G F D Q W R F P A - T N Q L P - - - - - - - - - - - - L G G L
Sb000154_Sorbi1    - - - - - - - - - - - - Y H Q F G A S A G A G G A A L - - G L E Q W R L P Q I Q H Q F P F L S G R P D A V P P T M S G I
 
AT5G02460.1     D P F D Q Q H Q M E Q Q N P G Y G L V T G S G Q Y R P K N I F - - H N L I S S S S S A S S A M V T A T A S Q L A S V K M
Sb000154_Sorbi1    Y P F D V E - - - - - - - - G H G - G D G T G - - - - - - - F A G H M L G A S K V P G S A G L I T - - - - Q L A S V K M
 
AT5G02460.1     E D S N N Q L N L S - - - - R Q L F G - - D E Q Q L W - - - - - - - - - - - N I H G A A A A - - - - - - - - - - - - - S
Sb000154_Sorbi1    E D N P A S A A M A N S S P R E F L G L P G N L Q F W G G G S N G G A N G N N G G G A G N A G G G G S G G G G G G G G G
 
AT5G02460.1     T A A A T S S W S E V S N N F S S S S T S N I -
Sb000154_Sorbi1    T V A P G S S W V D L S - G F N S S S S G N V L
 
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