fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G02460.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm049680 not found in 363aa AT5G02460.1 1st_1st 0.303501945 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G02460.1     MVFSSFPTYPDHSSNWQQQ---HQPITTTVGFTGNNINQQFLPHHPLPPQQQQTPPQLHH
gm049680_Glyma1 MVYTSIPSYID-PANWQQQQPNHQQ-------QGNNTAAS--SHLILPPPIQPPPPPPSQ
                **::*:*:* * .:*****   **         ***   .  .*  ***  * .**   :

AT5G02460.1     NNGNGGVAVPGGPGGLIRPGSMAERARLANIPLPETALKCPRCDSTNTKFCYFNNYSLTQ
gm049680_Glyma1 PHGLSGSTTAGS----IRPGSMADRARMANI--QEAPQKCPRCESTNTKFCYFNNYSLSQ
                 :* .* :..*.    *******:***:***   *:. *****:**************:*

AT5G02460.1     PRHFCKACRRYWTRGGALRSVPVGGGCRRNKRTKNSSGGGGGSTSSGNSKSQDSATSNDQ
gm049680_Glyma1 PRHFCKACRRYWTRGGTLRNVPVGGGCRRNKRSRGS--------SSSNTRS--PANSDRQ
                ****************:**.************::.*        **.*::*  .*.*: *

AT5G02460.1     YHHRAMANNQMGPPSSSSSLSSLLSSYNAGLIPGHDHNSNNNNILGLGSSLPP-LKLMPP
gm049680_Glyma1 -------------TASAGSASTTSGSSSADLVAS----------LGGGTGVPPSLRFMAP
                             .:*:.* *:  .* .*.*:..          ** *:.:** *::*.*

AT5G02460.1     L--------------DFTDNFTLQYGAVSAP-------SYHIGGGSSGGAAALLNGFDQW
gm049680_Glyma1 LHQLGDHHHLGGGGGEIGLSYGLNYGAISGPMGGIGDLNFHIGGTLSGG-GSMLSGLDQW
                *              ::  .: *:***:*.*       .:****  *** .::*.*:***

AT5G02460.1     RFPATNQLP-LGGLD--------PFDQQHQMEQQNPGYGLVTGSGQYRPKNIFHNLISSS
gm049680_Glyma1 RVPQTHQFPFLSGLEATSSHGLYPFEGASGSD----GYG---GT----PIKV--------
                *.* *:*:* *.**:        **:     :    ***   *:    * ::        

AT5G02460.1     SSASSAMVTATASQLASVKMEDS----NNQLNLSRQLFG------DEQQLWNIHGAAAAS
gm049680_Glyma1 --STSGII----SQLASVKMEDNRHHHHQELGLPRQFLGVNNNPNTNEQYWSGGG-----
                  ::*.::    **********.    :::*.*.**::*       ::* *.  *     

AT5G02460.1     TAAATSSWSEVSNNFSSSSTSNI--
gm049680_Glyma1 --GATSTWTDLSAFSSSSTTSNNAL
                  .***:*:::*   ***:***
BoxShade v3.31 C (beta, 970507) Output
AT5G02460.1     M V F S S F P T Y P D H S S N W Q Q Q - - - H Q P I T T T V G F T G N N I N Q Q F L P H H P L P P Q Q Q Q T P P Q L H H
gm049680_Glyma1    M V Y T S I P S Y I D - P A N W Q Q Q Q P N H Q Q - - - - - - - Q G N N T A A S - - S H L I L P P P I Q P P P P P P S Q
 
AT5G02460.1     N N G N G G V A V P G G P G G L I R P G S M A E R A R L A N I P L P E T A L K C P R C D S T N T K F C Y F N N Y S L T Q
gm049680_Glyma1    P H G L S G S T T A G S - - - - I R P G S M A D R A R M A N I - - Q E A P Q K C P R C E S T N T K F C Y F N N Y S L S Q
 
AT5G02460.1     P R H F C K A C R R Y W T R G G A L R S V P V G G G C R R N K R T K N S S G G G G G S T S S G N S K S Q D S A T S N D Q
gm049680_Glyma1    P R H F C K A C R R Y W T R G G T L R N V P V G G G C R R N K R S R G S - - - - - - - - S S S N T R S - - P A N S D R Q
 
AT5G02460.1     Y H H R A M A N N Q M G P P S S S S S L S S L L S S Y N A G L I P G H D H N S N N N N I L G L G S S L P P - L K L M P P
gm049680_Glyma1    - - - - - - - - - - - - - T A S A G S A S T T S G S S S A D L V A S - - - - - - - - - - L G G G T G V P P S L R F M A P
 
AT5G02460.1     L - - - - - - - - - - - - - - D F T D N F T L Q Y G A V S A P - - - - - - - S Y H I G G G S S G G A A A L L N G F D Q W
gm049680_Glyma1    L H Q L G D H H H L G G G G G E I G L S Y G L N Y G A I S G P M G G I G D L N F H I G G T L S G G - G S M L S G L D Q W
 
AT5G02460.1     R F P A T N Q L P - L G G L D - - - - - - - - P F D Q Q H Q M E Q Q N P G Y G L V T G S G Q Y R P K N I F H N L I S S S
gm049680_Glyma1    R V P Q T H Q F P F L S G L E A T S S H G L Y P F E G A S G S D - - - - G Y G - - - G T - - - - P I K V - - - - - - - -
 
AT5G02460.1     S S A S S A M V T A T A S Q L A S V K M E D S - - - - N N Q L N L S R Q L F G - - - - - - D E Q Q L W N I H G A A A A S
gm049680_Glyma1    - - S T S G I I - - - - S Q L A S V K M E D N R H H H H Q E L G L P R Q F L G V N N N P N T N E Q Y W S G G G - - - - -
 
AT5G02460.1     T A A A T S S W S E V S N N F S S S S T S N I - -
gm049680_Glyma1    - - G A T S T W T D L S A F S S S S T T S N N A L
 
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