fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G02470.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp019514 not found in 307aa AT5G03415.1 1st_not 0.402723735 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G02470.2     MSMEMELFVTPEKQRQHPSVSVEKTPVRRKLIVDD----DSE-IGSEKKGQSRTSGG---
pp019514_Pp1s74 --------------------MVSNGIDARLAHLDDPDSPDAEVIGGKKKRGGRAAGGEKG
                                     *.:    *   :**    *:* **.:**  .*::**   

AT5G02470.2     --GLRQFSVMVCQKLEAKKITTYKEVADEIISDFATIKQNAEKPL---NENEYNEKNIRR
pp019514_Pp1s74 GKGLRHFSMKVCEKVESKGRTTYNEVADELVAEFT----NPDSPHVSPDQQQYDEKNIRR
                  ***:**: **:*:*:*  ***:*****::::*:    *.:.*    ::::*:******

AT5G02470.2     RVYDALNVFMALDIIARDKKEIRWKGLPITCKKDVEEVKMDRNKVMSSVQKKAAFLKELR
pp019514_Pp1s74 RVYDALNVLMAVGIILKDKKDIQWKGFPSASIDDVADLKAESMRIRGRIERKAAYLHELQ
                ********:**:.** :***:*:***:* :. .** ::* :  :: . :::***:*:**:

AT5G02470.2     EKVSSLESLMSRNQEMVVKTQG--PAEGFTLPFILLETNPHAVVEIEISEDMQLVHLDFN
pp019514_Pp1s74 SQMTGLRNLVSRNESL---SQGNNSVPHVALPFILVQTRPQATVEVEISEDMQVVHFDFN
                .:::.*..*:***:.:   :**  ..  .:*****::*.*:*.**:*******:**:***

AT5G02470.2     STPFSVHDDAYILKLMQEQKQEQNRVSSS--------------------SSTHHQSQ---
pp019514_Pp1s74 STPFELHDDAYVLKAMKLQEQPGGTCSDGMVHADFEDEIGSFEEDSPPVSGVFQRSNFPA
                ****.:*****:** *: *:*  .  *..                    *...::*:   

AT5G02470.2     HSSAHSSSSSCIASGTSGPVCWNSGSIDTR-------
pp019514_Pp1s74 HPSSHYASMSGAGKNSWPPV---PGILKARVKHENVS
                *.*:* :* *  ...:  **   .* :.:*
BoxShade v3.31 C (beta, 970507) Output
AT5G02470.2     M S M E M E L F V T P E K Q R Q H P S V S V E K T P V R R K L I V D D - - - - D S E - I G S E K K G Q S R T S G G - - -
pp019514_Pp1s74    - - - - - - - - - - - - - - - - - - - - M V S N G I D A R L A H L D D P D S P D A E V I G G K K K R G G R A A G G E K G
 
AT5G02470.2     - - G L R Q F S V M V C Q K L E A K K I T T Y K E V A D E I I S D F A T I K Q N A E K P L - - - N E N E Y N E K N I R R
pp019514_Pp1s74    G K G L R H F S M K V C E K V E S K G R T T Y N E V A D E L V A E F T - - - - N P D S P H V S P D Q Q Q Y D E K N I R R
 
AT5G02470.2     R V Y D A L N V F M A L D I I A R D K K E I R W K G L P I T C K K D V E E V K M D R N K V M S S V Q K K A A F L K E L R
pp019514_Pp1s74    R V Y D A L N V L M A V G I I L K D K K D I Q W K G F P S A S I D D V A D L K A E S M R I R G R I E R K A A Y L H E L Q
 
AT5G02470.2     E K V S S L E S L M S R N Q E M V V K T Q G - - P A E G F T L P F I L L E T N P H A V V E I E I S E D M Q L V H L D F N
pp019514_Pp1s74    S Q M T G L R N L V S R N E S L - - - S Q G N N S V P H V A L P F I L V Q T R P Q A T V E V E I S E D M Q V V H F D F N
 
AT5G02470.2     S T P F S V H D D A Y I L K L M Q E Q K Q E Q N R V S S S - - - - - - - - - - - - - - - - - - - - S S T H H Q S Q - - -
pp019514_Pp1s74    S T P F E L H D D A Y V L K A M K L Q E Q P G G T C S D G M V H A D F E D E I G S F E E D S P P V S G V F Q R S N F P A
 
AT5G02470.2     H S S A H S S S S S C I A S G T S G P V C W N S G S I D T R - - - - - - -
pp019514_Pp1s74    H P S S H Y A S M S G A G K N S W P P V - - - P G I L K A R V K H E N V S
 
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