fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G02470.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt044443 not found in 355aa AT5G03415.1 1st_not 0.457198443 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G02470.2     MSMEMELFVTP----EKQRQHPSVSVEK------------------------TPVRRK--
pt044443_POPTR_ -------MVTGGGHLEDGDRHPSSAATRGGGGGATTGSWVSGQSVSTSGSVGSPSSRSEH
                       :**     *.  :*** :. :                        :*  *.  

AT5G02470.2     ------------------LIVDD----DSEIGSEKKGQSRTSGG------GLRQFSVMVC
pt044443_POPTR_ AMATPASDNTFLRLNHLDIHADDAATQDAAANKKKKRGQRAAGGADKSGRGLRQFSMKVC
                                  : .**    *:  ..:**  .*::**      ******: **

AT5G02470.2     QKLEAKKITTYKEVADEIISDFATIKQNAEKPLNENEYNEKNIRRRVYDALNVFMALDII
pt044443_POPTR_ EKVESKGTTTYNEVADELVAEFADPSNSVSTP-DQQQYDEKNIRRRVYDALNVLMALDII
                :*:*:*  ***:*****::::**  .:....* ::::*:**************:******

AT5G02470.2     ARDKKEIRWKGLPITCKKDVEEVKMDRNKVMSSVQKKAAFLKELREKVSSLESLMSRNQE
pt044443_POPTR_ SKDKKEIQWKGLPRTSLSDIEELKAERLGLRNRIEKKAAYLQELEEQFMGLQNLIQRNEQ
                ::*****:***** *. .*:**:* :*  : . ::****:*:**.*:. .*:.*:.**::

AT5G02470.2     MVVKTQGPAEGFTLPFILLETNPHAVVEIEISEDMQLVHLDFNSTPFSVHDDAYILKLMQ
pt044443_POPTR_ LYSSGNAPSGGVSLPFILVQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVLKAMK
                :  . :.*: *.:*****::*.***.**:**********:*******.:*** *:** *:

AT5G02470.2     --EQKQEQNRVS----------SSSSTHHQSQHSSAHSSSSSCIASGTSGPVCWNSGSID
pt044443_POPTR_ FCERHQSDNMAAPNPAADGGEGSSMSIMYQPQIRTSPRTNNP-VRLPTSPPL---PGIIK
                  *::*.:* .:          ** *  :*.*  ::  :... :   ** *:   .* *.

AT5G02470.2     TR-----
pt044443_POPTR_ ARVKHEH
                :*
BoxShade v3.31 C (beta, 970507) Output
AT5G02470.2     M S M E M E L F V T P - - - - E K Q R Q H P S V S V E K - - - - - - - - - - - - - - - - - - - - - - - - T P V R R K - -
pt044443_POPTR_    - - - - - - - M V T G G G H L E D G D R H P S S A A T R G G G G G A T T G S W V S G Q S V S T S G S V G S P S S R S E H
 
AT5G02470.2     - - - - - - - - - - - - - - - - - - L I V D D - - - - D S E I G S E K K G Q S R T S G G - - - - - - G L R Q F S V M V C
pt044443_POPTR_    A M A T P A S D N T F L R L N H L D I H A D D A A T Q D A A A N K K K K R G Q R A A G G A D K S G R G L R Q F S M K V C
 
AT5G02470.2     Q K L E A K K I T T Y K E V A D E I I S D F A T I K Q N A E K P L N E N E Y N E K N I R R R V Y D A L N V F M A L D I I
pt044443_POPTR_    E K V E S K G T T T Y N E V A D E L V A E F A D P S N S V S T P - D Q Q Q Y D E K N I R R R V Y D A L N V L M A L D I I
 
AT5G02470.2     A R D K K E I R W K G L P I T C K K D V E E V K M D R N K V M S S V Q K K A A F L K E L R E K V S S L E S L M S R N Q E
pt044443_POPTR_    S K D K K E I Q W K G L P R T S L S D I E E L K A E R L G L R N R I E K K A A Y L Q E L E E Q F M G L Q N L I Q R N E Q
 
AT5G02470.2     M V V K T Q G P A E G F T L P F I L L E T N P H A V V E I E I S E D M Q L V H L D F N S T P F S V H D D A Y I L K L M Q
pt044443_POPTR_    L Y S S G N A P S G G V S L P F I L V Q T R P H A T V E V E I S E D M Q L V H F D F N S T P F E L H D D N Y V L K A M K
 
AT5G02470.2     - - E Q K Q E Q N R V S - - - - - - - - - - S S S S T H H Q S Q H S S A H S S S S S C I A S G T S G P V C W N S G S I D
pt044443_POPTR_    F C E R H Q S D N M A A P N P A A D G G E G S S M S I M Y Q P Q I R T S P R T N N P - V R L P T S P P L - - - P G I I K
 
AT5G02470.2     T R - - - - -
pt044443_POPTR_    A R V K H E H
 
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