fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G02470.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt006716 not found in 299aa AT5G03415.1 not_not 0.455252918 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G02470.2     MSMEMELFVTPEKQR-----QHPSVSVEKTPVRRKLIVDDDSEIGSEKKGQ----SRTSG
pt006716_POPTR_ -------MATPASDSTFLRLNHLDIHADDAATQ------DAAANKKKKRGQRAVGADKSG
                       :.** .:      :* .: .:.:..:      * :   .:*:**    : .**

AT5G02470.2     GGLRQFSVMVCQKLEAKKITTYKEVADEIISDFATIKQNAEKPLNENEYNEKNIRRRVYD
pt006716_POPTR_ RGLRQFSIKVCEKVESKGTTTYNEVADELVAEFADPSNSVSTP-DQQQYDEKNIRRRVYD
                 ******: **:*:*:*  ***:*****::::**  .:....* ::::*:**********

AT5G02470.2     ALNVFMALDIIARDKKEIRWKGLPITCKKDVEEVKMDRNKVMSSVQKKAAFLKELREKVS
pt006716_POPTR_ ALNVLMALDIISKDKKEIQWKGLPRTSLSDIEELKVERLGLRNRIEKKAAYLQELEEQFV
                ****:******::*****:***** *. .*:**:*::*  : . ::****:*:**.*:. 

AT5G02470.2     SLESLMSRNQEMVVKTQGPAEGFTLPFILLETNPHAVVEIEISEDMQLVHLDFNSTPFSV
pt006716_POPTR_ GLQNLIQRNEQLYSSGNAPSGGVSLPFILVQTRPHATVEVEISEDMQLVHFDFNSTPFEL
                .*:.*:.**:::  . :.*: *.:*****::*.***.**:**********:*******.:

AT5G02470.2     HDDAYILKLMQ--EQKQEQNRV---------SSSSSTHHQSQHSSAHSSSSSCIASGTSG
pt006716_POPTR_ HDDNYVLKAMKFCERPQSDDMAPNPPADGGEGSSMSSMYQPQ-ILASPSTNTPVRHPTSP
                *** *:** *:  *: *.:: .         .** *: :*.*   * .*:.: :   ** 

AT5G02470.2     PVCWNSGSIDTR-----
pt006716_POPTR_ PL---PGIIKARVKNEH
                *:   .* *.:*
BoxShade v3.31 C (beta, 970507) Output
AT5G02470.2     M S M E M E L F V T P E K Q R - - - - - Q H P S V S V E K T P V R R K L I V D D D S E I G S E K K G Q - - - - S R T S G
pt006716_POPTR_    - - - - - - - M A T P A S D S T F L R L N H L D I H A D D A A T Q - - - - - - D A A A N K K K K R G Q R A V G A D K S G
 
AT5G02470.2     G G L R Q F S V M V C Q K L E A K K I T T Y K E V A D E I I S D F A T I K Q N A E K P L N E N E Y N E K N I R R R V Y D
pt006716_POPTR_    R G L R Q F S I K V C E K V E S K G T T T Y N E V A D E L V A E F A D P S N S V S T P - D Q Q Q Y D E K N I R R R V Y D
 
AT5G02470.2     A L N V F M A L D I I A R D K K E I R W K G L P I T C K K D V E E V K M D R N K V M S S V Q K K A A F L K E L R E K V S
pt006716_POPTR_    A L N V L M A L D I I S K D K K E I Q W K G L P R T S L S D I E E L K V E R L G L R N R I E K K A A Y L Q E L E E Q F V
 
AT5G02470.2     S L E S L M S R N Q E M V V K T Q G P A E G F T L P F I L L E T N P H A V V E I E I S E D M Q L V H L D F N S T P F S V
pt006716_POPTR_    G L Q N L I Q R N E Q L Y S S G N A P S G G V S L P F I L V Q T R P H A T V E V E I S E D M Q L V H F D F N S T P F E L
 
AT5G02470.2     H D D A Y I L K L M Q - - E Q K Q E Q N R V - - - - - - - - - S S S S S T H H Q S Q H S S A H S S S S S C I A S G T S G
pt006716_POPTR_    H D D N Y V L K A M K F C E R P Q S D D M A P N P P A D G G E G S S M S S M Y Q P Q - I L A S P S T N T P V R H P T S P
 
AT5G02470.2     P V C W N S G S I D T R - - - - -
pt006716_POPTR_    P L - - - P G I I K A R V K N E H
 
0