fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G02470.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt044443 not found in 355aa AT5G03415.1 1st_not 0.457198443 II
Pt006716 not found in 299aa AT5G03415.1 not_not 0.455252918 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G02470.2     -----------------------------------------------MSMEMELFVTPEK
pt044443_POPTR_ MVTGGGHLEDGDRHPSSAATRGGGGGATTGSWVSGQSVSTSGSVGSPSSRSEHAMATPAS
pt006716_POPTR_ ------------------------------------------------------MATPAS
                                                                      :.** .

AT5G02470.2     QR-----QHPSVSVEKTPVRRKLIVDDDSEIGSEKKGQSRT-----SGGGLRQFSVMVCQ
pt044443_POPTR_ DNTFLRLNHLDIHADDAATQ------DAAANKKKKRGQRAAGGADKSGRGLRQFSMKVCE
pt006716_POPTR_ DSTFLRLNHLDIHADDAATQ------DAAANKKKKRGQRAV-GADKSGRGLRQFSIKVCE
                :      :* .: .:.:..:      * :   .:*:**  .     ** ******: **:

AT5G02470.2     KLEAKKITTYKEVADEIISDFATIKQNAEKPLNENEYNEKNIRRRVYDALNVFMALDIIA
pt044443_POPTR_ KVESKGTTTYNEVADELVAEFADPSNSVSTP-DQQQYDEKNIRRRVYDALNVLMALDIIS
pt006716_POPTR_ KVESKGTTTYNEVADELVAEFADPSNSVSTP-DQQQYDEKNIRRRVYDALNVLMALDIIS
                *:*:*  ***:*****::::**  .:....* ::::*:**************:******:

AT5G02470.2     RDKKEIRWKGLPITCKKDVEEVKMDRNKVMSSVQKKAAFLKELREKVSSLESLMSRNQEM
pt044443_POPTR_ KDKKEIQWKGLPRTSLSDIEELKAERLGLRNRIEKKAAYLQELEEQFMGLQNLIQRNEQL
pt006716_POPTR_ KDKKEIQWKGLPRTSLSDIEELKVERLGLRNRIEKKAAYLQELEEQFVGLQNLIQRNEQL
                :*****:***** *. .*:**:* :*  : . ::****:*:**.*:. .*:.*:.**:::

AT5G02470.2     VVKTQGPAEGFTLPFILLETNPHAVVEIEISEDMQLVHLDFNSTPFSVHDDAYILKLMQ-
pt044443_POPTR_ YSSGNAPSGGVSLPFILVQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVLKAMKF
pt006716_POPTR_ YSSGNAPSGGVSLPFILVQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVLKAMKF
                  . :.*: *.:*****::*.***.**:**********:*******.:*** *:** *: 

AT5G02470.2     -EQKQEQNR----------VSSSSSTHHQSQHSSAHSSSSSCIASGTSGPVCWNSGSIDT
pt044443_POPTR_ CERHQSDNMAAPNPAADGGEGSSMSIMYQPQIRTSPRTNNP-VRLPTSPPL---PGIIKA
pt006716_POPTR_ CERPQSDDM-APNPPADGGEGSSMSSMYQPQILASPSTNTP-VRHPTSPPL---PGIIKA
                 *: *.::            .** *  :*.*  ::  :... :   ** *:   .* *.:

AT5G02470.2     R-----
pt044443_POPTR_ RVKHEH
pt006716_POPTR_ RVKNEH
                *
BoxShade v3.31 C (beta, 970507) Output
AT5G02470.2     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S M E M E L F V T P E K
pt044443_POPTR_    M V T G G G H L E D G D R H P S S A A T R G G G G G A T T G S W V S G Q S V S T S G S V G S P S S R S E H A M A T P A S
pt006716_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A T P A S
 
AT5G02470.2     Q R - - - - - Q H P S V S V E K T P V R R K L I V D D D S E I G S E K K G Q S R T - - - - - S G G G L R Q F S V M V C Q
pt044443_POPTR_    D N T F L R L N H L D I H A D D A A T Q - - - - - - D A A A N K K K K R G Q R A A G G A D K S G R G L R Q F S M K V C E
pt006716_POPTR_    D S T F L R L N H L D I H A D D A A T Q - - - - - - D A A A N K K K K R G Q R A V - G A D K S G R G L R Q F S I K V C E
 
AT5G02470.2     K L E A K K I T T Y K E V A D E I I S D F A T I K Q N A E K P L N E N E Y N E K N I R R R V Y D A L N V F M A L D I I A
pt044443_POPTR_    K V E S K G T T T Y N E V A D E L V A E F A D P S N S V S T P - D Q Q Q Y D E K N I R R R V Y D A L N V L M A L D I I S
pt006716_POPTR_    K V E S K G T T T Y N E V A D E L V A E F A D P S N S V S T P - D Q Q Q Y D E K N I R R R V Y D A L N V L M A L D I I S
 
AT5G02470.2     R D K K E I R W K G L P I T C K K D V E E V K M D R N K V M S S V Q K K A A F L K E L R E K V S S L E S L M S R N Q E M
pt044443_POPTR_    K D K K E I Q W K G L P R T S L S D I E E L K A E R L G L R N R I E K K A A Y L Q E L E E Q F M G L Q N L I Q R N E Q L
pt006716_POPTR_    K D K K E I Q W K G L P R T S L S D I E E L K V E R L G L R N R I E K K A A Y L Q E L E E Q F V G L Q N L I Q R N E Q L
 
AT5G02470.2     V V K T Q G P A E G F T L P F I L L E T N P H A V V E I E I S E D M Q L V H L D F N S T P F S V H D D A Y I L K L M Q -
pt044443_POPTR_    Y S S G N A P S G G V S L P F I L V Q T R P H A T V E V E I S E D M Q L V H F D F N S T P F E L H D D N Y V L K A M K F
pt006716_POPTR_    Y S S G N A P S G G V S L P F I L V Q T R P H A T V E V E I S E D M Q L V H F D F N S T P F E L H D D N Y V L K A M K F
 
AT5G02470.2     - E Q K Q E Q N R - - - - - - - - - - V S S S S S T H H Q S Q H S S A H S S S S S C I A S G T S G P V C W N S G S I D T
pt044443_POPTR_    C E R H Q S D N M A A P N P A A D G G E G S S M S I M Y Q P Q I R T S P R T N N P - V R L P T S P P L - - - P G I I K A
pt006716_POPTR_    C E R P Q S D D M - A P N P P A D G G E G S S M S S M Y Q P Q I L A S P S T N T P - V R H P T S P P L - - - P G I I K A
 
AT5G02470.2     R - - - - -
pt044443_POPTR_    R V K H E H
pt006716_POPTR_    R V K N E H
 
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