fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G02470.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb001186 not found in 340aa AT5G03415.1 not_not 0.424124513 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G02470.2     MSMEMELFVTPEKQRQH------------------PSVSV-------EKTPVRRKLIVD-
Sb001186_Sorbi1 ----MVSGAGPSGGAAHSASTGGGGGSPSDRGGAAPSASASVSTPASESTVARRLNGLDL
                    *   . *.    *                  **.*.       *.* .**   :* 

AT5G02470.2     --DDS-----EIGSEKKGQSRT-----SGGGLRQFSVMVCQKLEAKKITTYKEVADEIIS
Sb001186_Sorbi1 QGDDAPSSQPAASKKKKKGSRAVGPDKNGRGLRQFSMRVCEKVESKGRTTYNEVADELVA
                  **:       ..:**  **:     .* ******: **:*:*:*  ***:*****:::

AT5G02470.2     DFATIKQNAEKPLNEN----EYNEKNIRRRVYDALNVFMALDIIARDKKEIRWKGLPITC
Sb001186_Sorbi1 EFSDPNINIDSPDPDNPSAQQYDEKNIRRRVYDALNVLMAMEIISKDKKEIQWRGLPKTS
                :*:  : * :.*  :*    :*:**************:**::**::*****:*:*** *.

AT5G02470.2     KKDVEEVKMDRNKVMSSVQKKAAFLKELREKVSSLESLMSRNQEMVVKTQGPAEGFTLPF
Sb001186_Sorbi1 MNDIEELKTEVIRLKGRIDKKAAYLQDLQDQYVCLQNLVRRNEQLYGSGDAPSGGVALPF
                 :*:**:* :  :: . ::****:*::*:::  .*:.*: **:::  . :.*: *.:***

AT5G02470.2     ILLETNPHAVVEIEISEDMQLVHLDFNSTPFSVHDDAYILKLMQEQKQEQNRVSSS----
Sb001186_Sorbi1 ILVKTRPHATVEVEISEDMQLVHFDFNSTPFELQDDTFVLKAMGLSGKEENDCTQAPVVN
                **::*.***.**:**********:*******.::**:::** *  . :*:*  :.:    

AT5G02470.2     ----SSTHHQSQHSSAHSSSSSCIASGTSGPVCWNSGSIDTR-----
Sb001186_Sorbi1 GGECSSTPNNYWHQSPQPPGPRGVRVPNSPPI---PGILKGRVKHEH
                    *** ::  *.*.:....  :   .* *:   .* :. *
BoxShade v3.31 C (beta, 970507) Output
AT5G02470.2     M S M E M E L F V T P E K Q R Q H - - - - - - - - - - - - - - - - - - P S V S V - - - - - - - E K T P V R R K L I V D -
Sb001186_Sorbi1    - - - - M V S G A G P S G G A A H S A S T G G G G G S P S D R G G A A P S A S A S V S T P A S E S T V A R R L N G L D L
 
AT5G02470.2     - - D D S - - - - - E I G S E K K G Q S R T - - - - - S G G G L R Q F S V M V C Q K L E A K K I T T Y K E V A D E I I S
Sb001186_Sorbi1    Q G D D A P S S Q P A A S K K K K K G S R A V G P D K N G R G L R Q F S M R V C E K V E S K G R T T Y N E V A D E L V A
 
AT5G02470.2     D F A T I K Q N A E K P L N E N - - - - E Y N E K N I R R R V Y D A L N V F M A L D I I A R D K K E I R W K G L P I T C
Sb001186_Sorbi1    E F S D P N I N I D S P D P D N P S A Q Q Y D E K N I R R R V Y D A L N V L M A M E I I S K D K K E I Q W R G L P K T S
 
AT5G02470.2     K K D V E E V K M D R N K V M S S V Q K K A A F L K E L R E K V S S L E S L M S R N Q E M V V K T Q G P A E G F T L P F
Sb001186_Sorbi1    M N D I E E L K T E V I R L K G R I D K K A A Y L Q D L Q D Q Y V C L Q N L V R R N E Q L Y G S G D A P S G G V A L P F
 
AT5G02470.2     I L L E T N P H A V V E I E I S E D M Q L V H L D F N S T P F S V H D D A Y I L K L M Q E Q K Q E Q N R V S S S - - - -
Sb001186_Sorbi1    I L V K T R P H A T V E V E I S E D M Q L V H F D F N S T P F E L Q D D T F V L K A M G L S G K E E N D C T Q A P V V N
 
AT5G02470.2     - - - - S S T H H Q S Q H S S A H S S S S S C I A S G T S G P V C W N S G S I D T R - - - - -
Sb001186_Sorbi1    G G E C S S T P N N Y W H Q S P Q P P G P R G V R V P N S P P I - - - P G I L K G R V K H E H
 
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