fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G02470.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb002565 not found in 392aa AT5G03415.1 1st_not 0.429961089 II
Sb001186 not found in 340aa AT5G03415.1 not_not 0.424124513 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G02470.2     -MSM---------------------------EMELFVTP---------------------
Sb002565_Sorbi1 MVSGTAHNPDGGGGAQGTQRQPPPPPHTQVGARTPLATPPPVSGGAAHSASTSGGSAGSP
Sb001186_Sorbi1 MVSG--------------------------------AGP---SGGAAHSASTGGG--GGS
                 :*                                 . *                     

AT5G02470.2     --EKQRQH--------------PSVSVE-KTPVRRKLIV----------DD--DSEIGSE
Sb002565_Sorbi1 PSSRSEQHAPDGAGKGPALGAAPAAAAAASTPASDSTFL-RLNNLDINGDDAPSSQAPTS
Sb001186_Sorbi1 PSDRG--------------GAAPSASASVSTPASESTVARRLNGLDLQGDDAPSSQPAAS
                  .:                  *:.:.  .**.  . .           **  .*:  :.

AT5G02470.2     KKGQSRT-------SGGGLRQFSVMVCQKLEAKKITTYKEVADEIISDFATIKQNAEKPL
Sb002565_Sorbi1 KKKRRGTRAVGPDKGNRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFTDPNNNIEAPD
Sb001186_Sorbi1 KKKKKGSRAVGPDKNGRGLRQFSMRVCEKVESKGRTTYNEVADELVAEFSDPNINIDSPD
                ** :  :       .. ******: **:*:*:*  ***:*****::::*:  : * : * 

AT5G02470.2     NEN----EYNEKNIRRRVYDALNVFMALDIIARDKKEIRWKGLPITCKKDVEEVKMDRNK
Sb002565_Sorbi1 PDNPNAQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSISDIEELKKEVVG
Sb001186_Sorbi1 PDNPSAQQYDEKNIRRRVYDALNVLMAMEIISKDKKEIQWRGLPKTSMNDIEELKTEVIR
                 :*    :*:**************:**::**::*****:*:*** *. .*:**:* :   

AT5G02470.2     VMSSVQKKAAFLKELREKVSSLESLMSRNQEMVVKTQGPAEGFTLPFILLETNPHAVVEI
Sb002565_Sorbi1 LKGRIEKKSAYLQELQDQYVGLQNLIQRNEQLYGSGNTPSGGVDLPFILVQTRPHATVEV
Sb001186_Sorbi1 LKGRIDKKAAYLQDLQDQYVCLQNLVRRNEQLYGSGDAPSGGVALPFILVKTRPHATVEV
                : . ::**:*:*::*:::   *:.*: **:::  . : *: *. *****::*.***.**:

AT5G02470.2     EISEDMQLVHLDFNSTPFSVHDDAYILKLMQEQKQEQNRV----------SSSSSTHHQS
Sb002565_Sorbi1 EISEDMQLVHFDFNSTPFELHDDSYVLKEMRFCGKEQHEGAQESTSNGGESSSMSNIYWQ
Sb001186_Sorbi1 EISEDMQLVHFDFNSTPFELQDDTFVLKAMGLSGKEENDCTQAPVVNGGECSSTPNNYWH
                **********:*******.::**:::** *    :*::            .** .. :  

AT5G02470.2     QHSSAHSSSSSCIASGTSGPVCWNSGSIDTR-----
Sb002565_Sorbi1 QVHHLERPNNGTVRLPSSPPI---PGILKGRVKHEH
Sb001186_Sorbi1 Q--SPQPPGPRGVRVPNSPPI---PGILKGRVKHEH
                *    . ..   :   .* *:   .* :. *
BoxShade v3.31 C (beta, 970507) Output
AT5G02470.2     - M S M - - - - - - - - - - - - - - - - - - - - - - - - - - - E M E L F V T P - - - - - - - - - - - - - - - - - - - - -
Sb002565_Sorbi1    M V S G T A H N P D G G G G A Q G T Q R Q P P P P P H T Q V G A R T P L A T P P P V S G G A A H S A S T S G G S A G S P
Sb001186_Sorbi1    M V S G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A G P - - - S G G A A H S A S T G G G - - G G S
 
AT5G02470.2     - - E K Q R Q H - - - - - - - - - - - - - - P S V S V E - K T P V R R K L I V - - - - - - - - - - D D - - D S E I G S E
Sb002565_Sorbi1    P S S R S E Q H A P D G A G K G P A L G A A P A A A A A A S T P A S D S T F L - R L N N L D I N G D D A P S S Q A P T S
Sb001186_Sorbi1    P S D R G - - - - - - - - - - - - - - G A A P S A S A S V S T P A S E S T V A R R L N G L D L Q G D D A P S S Q P A A S
 
AT5G02470.2     K K G Q S R T - - - - - - - S G G G L R Q F S V M V C Q K L E A K K I T T Y K E V A D E I I S D F A T I K Q N A E K P L
Sb002565_Sorbi1    K K K R R G T R A V G P D K G N R G L R Q F S M K V C E K V E S K G R T T Y N E V A D E L V A E F T D P N N N I E A P D
Sb001186_Sorbi1    K K K K K G S R A V G P D K N G R G L R Q F S M R V C E K V E S K G R T T Y N E V A D E L V A E F S D P N I N I D S P D
 
AT5G02470.2     N E N - - - - E Y N E K N I R R R V Y D A L N V F M A L D I I A R D K K E I R W K G L P I T C K K D V E E V K M D R N K
Sb002565_Sorbi1    P D N P N A Q Q Y D E K N I R R R V Y D A L N V L M A M D I I S K D K K E I Q W K G L P R T S I S D I E E L K K E V V G
Sb001186_Sorbi1    P D N P S A Q Q Y D E K N I R R R V Y D A L N V L M A M E I I S K D K K E I Q W R G L P K T S M N D I E E L K T E V I R
 
AT5G02470.2     V M S S V Q K K A A F L K E L R E K V S S L E S L M S R N Q E M V V K T Q G P A E G F T L P F I L L E T N P H A V V E I
Sb002565_Sorbi1    L K G R I E K K S A Y L Q E L Q D Q Y V G L Q N L I Q R N E Q L Y G S G N T P S G G V D L P F I L V Q T R P H A T V E V
Sb001186_Sorbi1    L K G R I D K K A A Y L Q D L Q D Q Y V C L Q N L V R R N E Q L Y G S G D A P S G G V A L P F I L V K T R P H A T V E V
 
AT5G02470.2     E I S E D M Q L V H L D F N S T P F S V H D D A Y I L K L M Q E Q K Q E Q N R V - - - - - - - - - - S S S S S T H H Q S
Sb002565_Sorbi1    E I S E D M Q L V H F D F N S T P F E L H D D S Y V L K E M R F C G K E Q H E G A Q E S T S N G G E S S S M S N I Y W Q
Sb001186_Sorbi1    E I S E D M Q L V H F D F N S T P F E L Q D D T F V L K A M G L S G K E E N D C T Q A P V V N G G E C S S T P N N Y W H
 
AT5G02470.2     Q H S S A H S S S S S C I A S G T S G P V C W N S G S I D T R - - - - -
Sb002565_Sorbi1    Q V H H L E R P N N G T V R L P S S P P I - - - P G I L K G R V K H E H
Sb001186_Sorbi1    Q - - S P Q P P G P R G V R V P N S P P I - - - P G I L K G R V K H E H
 
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