fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G02470.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm029427 not found in 337aa AT5G03415.1 1st_not 0.447470817 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G02470.2     MSMEMELFVTPEKQRQ--------------------HPSVSVEK---TPVRRKLIV----
gm029427_Glyma1 MGTQPQQTFREEEEEEMQGHGTTMSGQSMSTSRSVGSPSSRSEQTMATPASDSTFLRLNH
                *. : :  .  *::.:                     **   *:   **.  . ::    

AT5G02470.2     -----DDDSEIGS----EKKGQSRT----SGGGLRQFSVMVCQKLEAKKITTYKEVADEI
gm029427_Glyma1 LDIHGDDAGSQGTVAKKKKRGQRAVGGDKSGRGLRQFSMKVCEKVESKGRTTYNEVADEL
                     ** .. *:    :*:**  .    ** ******: **:*:*:*  ***:*****:

AT5G02470.2     ISDFATIKQNAEKPLNENEYNEKNIRRRVYDALNVFMALDIIARDKKEIRWKGLPITCKK
gm029427_Glyma1 VAEFADPINGVSTP-DQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSLS
                :::**   :....* ::::*:**************:**:***::*****:***** *. .

AT5G02470.2     DVEEVKMDRNKVMSSVQKKAAFLKELREKVSSLESLMSRNQEMVVKTQGPAEGFTLPFIL
gm029427_Glyma1 DIEELKSERLGLRNRIEKKAAYLQELEEQYIGLQKLIQRNEQLYSSGNAPNGGVSLPFIL
                *:**:* :*  : . ::****:*:**.*:  .*:.*:.**:::  . :.*  *.:*****

AT5G02470.2     LETNPHAVVEIEISEDMQLVHLDFNSTPFSVHDDAYILKLMQEQKQEQNRVSSSSSTHHQ
gm029427_Glyma1 VQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVLKAMKFCERSQNDNTTDNST-DG
                ::*.***.**:**********:*******.:*** *:** *:  ::.**  ::..** . 

AT5G02470.2     SQHSSAHSSSSSCIAS-----GTSGPVCWNSGSIDTR-----
gm029427_Glyma1 GEGSSIYAQVPTSVSNPPNRPPSSPPL---PGILKARVKNEH
                .: ** ::. .:.::.      :* *:   .* :.:*
BoxShade v3.31 C (beta, 970507) Output
AT5G02470.2     M S M E M E L F V T P E K Q R Q - - - - - - - - - - - - - - - - - - - - H P S V S V E K - - - T P V R R K L I V - - - -
gm029427_Glyma1    M G T Q P Q Q T F R E E E E E E M Q G H G T T M S G Q S M S T S R S V G S P S S R S E Q T M A T P A S D S T F L R L N H
 
AT5G02470.2     - - - - - D D D S E I G S - - - - E K K G Q S R T - - - - S G G G L R Q F S V M V C Q K L E A K K I T T Y K E V A D E I
gm029427_Glyma1    L D I H G D D A G S Q G T V A K K K K R G Q R A V G G D K S G R G L R Q F S M K V C E K V E S K G R T T Y N E V A D E L
 
AT5G02470.2     I S D F A T I K Q N A E K P L N E N E Y N E K N I R R R V Y D A L N V F M A L D I I A R D K K E I R W K G L P I T C K K
gm029427_Glyma1    V A E F A D P I N G V S T P - D Q Q Q Y D E K N I R R R V Y D A L N V L M A M D I I S K D K K E I Q W K G L P R T S L S
 
AT5G02470.2     D V E E V K M D R N K V M S S V Q K K A A F L K E L R E K V S S L E S L M S R N Q E M V V K T Q G P A E G F T L P F I L
gm029427_Glyma1    D I E E L K S E R L G L R N R I E K K A A Y L Q E L E E Q Y I G L Q K L I Q R N E Q L Y S S G N A P N G G V S L P F I L
 
AT5G02470.2     L E T N P H A V V E I E I S E D M Q L V H L D F N S T P F S V H D D A Y I L K L M Q E Q K Q E Q N R V S S S S S T H H Q
gm029427_Glyma1    V Q T R P H A T V E V E I S E D M Q L V H F D F N S T P F E L H D D N Y V L K A M K F C E R S Q N D N T T D N S T - D G
 
AT5G02470.2     S Q H S S A H S S S S S C I A S - - - - - G T S G P V C W N S G S I D T R - - - - -
gm029427_Glyma1    G E G S S I Y A Q V P T S V S N P P N R P P S S P P L - - - P G I L K A R V K N E H
 
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