fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G02840.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp031792 not found in 410aa AT5G52660.1 1st_not 0.418103448 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G02840.1     MTSTNPVVAEVIPAETSTDATETTIATTEAGEAPEKKVRKAYTITKSRESWTEGEHDKFL
pp031792_Pp1s16 MNAASSEMLGVMVA----GSTLSSIPPIPVSEEGSKKIRKPYTITKSRESWTEQEHDKFL
                *.::.. :  *: *    .:* ::*..  ..*  .**:**.************ ******

AT5G02840.1     EALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTLAHVPPPRPKRKAAHPYPQ
pp031792_Pp1s16 EALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGTGEHVPPPRPKRKSVQPYPQ
                ************** **************************  **********:.:****

AT5G02840.1     KASKNAQMSLHVSMSFPTQI----------NNLPGYTPWDDDTSALLNIAVSGVIPPEDE
pp031792_Pp1s16 KAPKTAQ--VQVSDGLRTQAVQTESSYGTGSHKPPMTSTSPSISAWVQHSVS--------
                **.*.**  ::** .: **           .: *  *. . . ** :: :**        

AT5G02840.1     LDTLCGAEVDVGSNDMISETSP-----------SASGIGSSSRTLSDSKG-----LRLAK
pp031792_Pp1s16 ------------PNPSISYDAPGIKSEGEGVNLSAVRVPSNSISGSSPGGWPQHVLPASQ
                            .*  **  :*           **  : *.* : *.. *     *  ::

AT5G02840.1     QAPS--MHGLPDFAEVYNFIGSVFDPDSKGRMKKLKEMDPINFETVLLLMRNLTVNLSNP
pp031792_Pp1s16 VAPESCIRAAPDFAEVYKFIGSVFDPGVSGHLRKLKEMSAIDRETVLLLMHNLSINLASP
                 **.  ::. *******:********. .*:::*****..*: *******:**::**:.*

AT5G02840.1     DFE----------------------------------PTSE-------YVDA-AEEG---
pp031792_Pp1s16 DFEEHDAGEDSPSVSGQAGTLAPSTPILVSPRSGNSAPTQHRASLLQAYADSTADAGTAR
                ***                                  **..       *.*: *: *   

AT5G02840.1     -HEH-----------------------------------------------------LSS
pp031792_Pp1s16 RHSHDGGRVISASFTSCGVSPAPEVLEPVSLGLPCTALQPQSPVLTTKPESVYSITSLPS
                 *.*                                                     *.*

AT5G02840.1     ----------------
pp031792_Pp1s16 LPAGLAGDESVDTWWT
BoxShade v3.31 C (beta, 970507) Output
AT5G02840.1     M T S T N P V V A E V I P A E T S T D A T E T T I A T T E A G E A P E K K V R K A Y T I T K S R E S W T E G E H D K F L
pp031792_Pp1s16    M N A A S S E M L G V M V A - - - - G S T L S S I P P I P V S E E G S K K I R K P Y T I T K S R E S W T E Q E H D K F L
 
AT5G02840.1     E A L Q L F D R D W K K I E D F V G S K T V I Q I R S H A Q K Y F L K V Q K N G T L A H V P P P R P K R K A A H P Y P Q
pp031792_Pp1s16    E A L Q L F D R D W K K I E A F V G S K T V I Q I R S H A Q K Y F L K V Q K N G T G E H V P P P R P K R K S V Q P Y P Q
 
AT5G02840.1     K A S K N A Q M S L H V S M S F P T Q I - - - - - - - - - - N N L P G Y T P W D D D T S A L L N I A V S G V I P P E D E
pp031792_Pp1s16    K A P K T A Q - - V Q V S D G L R T Q A V Q T E S S Y G T G S H K P P M T S T S P S I S A W V Q H S V S - - - - - - - -
 
AT5G02840.1     L D T L C G A E V D V G S N D M I S E T S P - - - - - - - - - - - S A S G I G S S S R T L S D S K G - - - - - L R L A K
pp031792_Pp1s16    - - - - - - - - - - - - P N P S I S Y D A P G I K S E G E G V N L S A V R V P S N S I S G S S P G G W P Q H V L P A S Q
 
AT5G02840.1     Q A P S - - M H G L P D F A E V Y N F I G S V F D P D S K G R M K K L K E M D P I N F E T V L L L M R N L T V N L S N P
pp031792_Pp1s16    V A P E S C I R A A P D F A E V Y K F I G S V F D P G V S G H L R K L K E M S A I D R E T V L L L M H N L S I N L A S P
 
AT5G02840.1     D F E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - P T S E - - - - - - - Y V D A - A E E G - - -
pp031792_Pp1s16    D F E E H D A G E D S P S V S G Q A G T L A P S T P I L V S P R S G N S A P T Q H R A S L L Q A Y A D S T A D A G T A R
 
AT5G02840.1     - H E H - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - L S S
pp031792_Pp1s16    R H S H D G G R V I S A S F T S C G V S P A P E V L E P V S L G L P C T A L Q P Q S P V L T T K P E S V Y S I T S L P S
 
AT5G02840.1     - - - - - - - - - - - - - - - -
pp031792_Pp1s16    L P A G L A G D E S V D T W W T
 
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