fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G02840.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt007501 not found in 302aa AT3G09600.2 1st_not 0.616379310 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G02840.1     ---------MTSTN--------------PVVAEVIPAETST-DATETTIATTEAG--EAP
pt007501_POPTR_ MIMNANSSSSTSTSTAGAGAETGANPAGPSQSMATPTSSSTPPATGTGTGTTAAASSDGS
                          ***.              *  : . *:.:**  ** *  .** *.  :..

AT5G02840.1     EKKVRKAYTITKSRESWTEGEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFL
pt007501_POPTR_ GKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFL
                 *****.************ ****************************************

AT5G02840.1     KVQKNGTLAHVPPPRPKRKAAHPYPQKASKNAQMSLHVSMSFPTQINNL-PGYTPWDDDT
pt007501_POPTR_ KVQKNGTSAHVPPPRPKRKASHPYPQKASKNVLVPLPASMAYASSTNTFAPGYALW-DET
                ******* ************:**********. :.* .**::.:. *.: ***: * *:*

AT5G02840.1     SALLNIAVSGVIPPEDELDTLCGAEVDVGSNDMISETSPSASGIGSSSRTLSDSKGLRLA
pt007501_POPTR_ SVLINSATSKIMPSQDELPNLHGAEADIGPK-CVSSSNNTVSGLGTSSRTLPSAEMPKQG
                *.*:* *.* ::*.:*** .* ***.*:*.:  :*.:. :.**:*:*****..::  : .

AT5G02840.1     KQAPSMHGLPDFAEVYNFIGSVFDPDSKGRMKKLKEMDPINFETVLLLMRNLTVNLSNPD
pt007501_POPTR_ KQAPVLHGIPDFAEVYSFIGSVFDPDTKGHVEKLQEMDPINFETVLLLMRNLTVNLSSPD
                **** :**:*******.*********:**:::**:**********************.**

AT5G02840.1     FEPTSEYVDAAEEGHEHLSS
pt007501_POPTR_ FEPY----------------
                ***
BoxShade v3.31 C (beta, 970507) Output
AT5G02840.1     - - - - - - - - - M T S T N - - - - - - - - - - - - - - P V V A E V I P A E T S T - D A T E T T I A T T E A G - - E A P
pt007501_POPTR_    M I M N A N S S S S T S T S T A G A G A E T G A N P A G P S Q S M A T P T S S S T P P A T G T G T G T T A A A S S D G S
 
AT5G02840.1     E K K V R K A Y T I T K S R E S W T E G E H D K F L E A L Q L F D R D W K K I E D F V G S K T V I Q I R S H A Q K Y F L
pt007501_POPTR_    G K K V R K P Y T I T K S R E S W T E E E H D K F L E A L Q L F D R D W K K I E D F V G S K T V I Q I R S H A Q K Y F L
 
AT5G02840.1     K V Q K N G T L A H V P P P R P K R K A A H P Y P Q K A S K N A Q M S L H V S M S F P T Q I N N L - P G Y T P W D D D T
pt007501_POPTR_    K V Q K N G T S A H V P P P R P K R K A S H P Y P Q K A S K N V L V P L P A S M A Y A S S T N T F A P G Y A L W - D E T
 
AT5G02840.1     S A L L N I A V S G V I P P E D E L D T L C G A E V D V G S N D M I S E T S P S A S G I G S S S R T L S D S K G L R L A
pt007501_POPTR_    S V L I N S A T S K I M P S Q D E L P N L H G A E A D I G P K - C V S S S N N T V S G L G T S S R T L P S A E M P K Q G
 
AT5G02840.1     K Q A P S M H G L P D F A E V Y N F I G S V F D P D S K G R M K K L K E M D P I N F E T V L L L M R N L T V N L S N P D
pt007501_POPTR_    K Q A P V L H G I P D F A E V Y S F I G S V F D P D T K G H V E K L Q E M D P I N F E T V L L L M R N L T V N L S S P D
 
AT5G02840.1     F E P T S E Y V D A A E E G H E H L S S
pt007501_POPTR_    F E P Y - - - - - - - - - - - - - - - -
 
0