fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G02840.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb027895 not found in 294aa AT5G52660.1 1st_not 0.433189655 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G02840.1     ----MTSTNPVVAEVIPAETSTDATETTIATTEAGEAPEKKVRKAYTITKSRESWTEGEH
Sb027895_Sorbi1 DPSPLTFLSMVSASAPPPPLQSDAAGS-------GEDASKKVRKPYTITKSRESWTEQEH
                    :*  . * *.. *.  .:**: :       ** ..*****.************ **

AT5G02840.1     DKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTLAHVPPPRPKRKAAH
Sb027895_Sorbi1 DKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGTSEHVPPPRPKRKAAH
                ****************** **************************  *************

AT5G02840.1     PYPQKASKNAQMSLHVSMSFPTQINNLPGYTPWDDDTS----ALLNIAVSGVIP---PED
Sb027895_Sorbi1 PYPQKASKNE-----------------PNYGLKTDSSSIHRNSGMNVSVSSWAHSSIPQA
                *********                  *.*    *.:*    : :*::**.      *: 

AT5G02840.1     ELDTLCGAEVDVGSNDMISETSPSASGIGSSS-----RTLSDSKGLRLAKQAPSMHGLPD
Sb027895_Sorbi1 VASTMVKEDLGAG--------TPGPNNFCSSSTEGPPRTWQPGETNDQINQVPSLRLMPD
                  .*:   ::..*        :*....: ***     ** . .:     :*.**:: :**

AT5G02840.1     FAEVYNFIGSVFDPDSKGRMKKLKEMDPINFETVLLLMRNLTVNLSNPDFEPTSEYV---
Sb027895_Sorbi1 FAEVYSFLGSVFDPSTSGHLQKLKEMNPIDVETALLLMRNLSINLTSPDFEDQRKLLSSY
                *****.*:******.:.*:::*****:**:.**.*******::**:.****   : :   

AT5G02840.1     ---DAAEEGHEHLSS--------
Sb027895_Sorbi1 STSDGLQLGSSRSSALAMSTPFM
                   *. : * .: *:
BoxShade v3.31 C (beta, 970507) Output
AT5G02840.1     - - - - M T S T N P V V A E V I P A E T S T D A T E T T I A T T E A G E A P E K K V R K A Y T I T K S R E S W T E G E H
Sb027895_Sorbi1    D P S P L T F L S M V S A S A P P P P L Q S D A A G S - - - - - - - G E D A S K K V R K P Y T I T K S R E S W T E Q E H
 
AT5G02840.1     D K F L E A L Q L F D R D W K K I E D F V G S K T V I Q I R S H A Q K Y F L K V Q K N G T L A H V P P P R P K R K A A H
Sb027895_Sorbi1    D K F L E A L Q L F D R D W K K I E A F V G S K T V I Q I R S H A Q K Y F L K V Q K N G T S E H V P P P R P K R K A A H
 
AT5G02840.1     P Y P Q K A S K N A Q M S L H V S M S F P T Q I N N L P G Y T P W D D D T S - - - - A L L N I A V S G V I P - - - P E D
Sb027895_Sorbi1    P Y P Q K A S K N E - - - - - - - - - - - - - - - - - P N Y G L K T D S S S I H R N S G M N V S V S S W A H S S I P Q A
 
AT5G02840.1     E L D T L C G A E V D V G S N D M I S E T S P S A S G I G S S S - - - - - R T L S D S K G L R L A K Q A P S M H G L P D
Sb027895_Sorbi1    V A S T M V K E D L G A G - - - - - - - - T P G P N N F C S S S T E G P P R T W Q P G E T N D Q I N Q V P S L R L M P D
 
AT5G02840.1     F A E V Y N F I G S V F D P D S K G R M K K L K E M D P I N F E T V L L L M R N L T V N L S N P D F E P T S E Y V - - -
Sb027895_Sorbi1    F A E V Y S F L G S V F D P S T S G H L Q K L K E M N P I D V E T A L L L M R N L S I N L T S P D F E D Q R K L L S S Y
 
AT5G02840.1     - - - D A A E E G H E H L S S - - - - - - - -
Sb027895_Sorbi1    S T S D G L Q L G S S R S S A L A M S T P F M
 
0