fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G02840.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb033225 SNAPNHLRLGLLDMLV in 376/488 AT5G52660.2 not_not 0.413793103 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G02840.1     --------------------MTSTNPVVAEVIPA------ETSTDATETTIATTEAGEAP
Sb033225_Sorbi1 GLRYATRKEEQEGSGRSMVSMSTTPHPLDPSVPAVAGGGKEEEEEAGRAREEAAAAAAAP
                                    *::*   :   :**      * . :* .:   :: *. **

AT5G02840.1     E----------------KKVRKAYTITKSRESWTEGEHDKFLEALQLFDRDWKKIEDFVG
Sb033225_Sorbi1 AAVPVPTVGNDDDDDGPRRVRKPYTITKSRESWTDPEHDKFLEALQLFDRDWKKIEAYVG
                                 ::***.***********: ******************** :**

AT5G02840.1     SKTVIQIRSHAQKYFLKVQKNGTLAHVPPPRPKRKAAHPYPQKASKNAQMSLHVSMSFPT
Sb033225_Sorbi1 SKTVIQIRSHAQKYFLKVQKNGTGEHLPPPRPKRKAAHPYPHKASKKA-----LQVVLPQ
                ***********************  *:**************:****:*     :.: :* 

AT5G02840.1     QINNLPGY---TPWDDDTSALLNIAVSGVIPPEDELDTLCGAEVDVGSNDM--ISETSP-
Sb033225_Sorbi1 QASHIMEQGCGTPMDTATVA-----------------------TDSSANDAFPVQHFSPR
                * .::      ** *  * *                       .* .:**   :.. ** 

AT5G02840.1     --------SASGIGSSSRTLSDSKGLRLAKQAPSMHGLPDFAEVYNFIGSVFDPDSKGRM
Sb033225_Sorbi1 HTQGATYNNSSSIGSQSGTWPTSEGTEQDIRHPALSAMPDFARVYNFLGSIFDPETNGHL
                        .:*.***.* * . *:* .   : *:: .:****.****:**:***:::*::

AT5G02840.1     KKLKEMDPINFETVLLLMRNLTVNLSNPDFEPTSEYVDA------AEEGHEHLSS-----
Sb033225_Sorbi1 QQLKEMDPIDAETVLLLMKNLSINLTSPNFEEHRRLLSSHASSMDQEMGSSHIHLPFMIT
                ::*******: *******:**::**:.*:**   . :.:       * * .*:       

AT5G02840.1     --
Sb033225_Sorbi1 SK
BoxShade v3.31 C (beta, 970507) Output
AT5G02840.1     - - - - - - - - - - - - - - - - - - - - M T S T N P V V A E V I P A - - - - - - E T S T D A T E T T I A T T E A G E A P
Sb033225_Sorbi1    G L R Y A T R K E E Q E G S G R S M V S M S T T P H P L D P S V P A V A G G G K E E E E E A G R A R E E A A A A A A A P
 
AT5G02840.1     E - - - - - - - - - - - - - - - - K K V R K A Y T I T K S R E S W T E G E H D K F L E A L Q L F D R D W K K I E D F V G
Sb033225_Sorbi1    A A V P V P T V G N D D D D D G P R R V R K P Y T I T K S R E S W T D P E H D K F L E A L Q L F D R D W K K I E A Y V G
 
AT5G02840.1     S K T V I Q I R S H A Q K Y F L K V Q K N G T L A H V P P P R P K R K A A H P Y P Q K A S K N A Q M S L H V S M S F P T
Sb033225_Sorbi1    S K T V I Q I R S H A Q K Y F L K V Q K N G T G E H L P P P R P K R K A A H P Y P H K A S K K A - - - - - L Q V V L P Q
 
AT5G02840.1     Q I N N L P G Y - - - T P W D D D T S A L L N I A V S G V I P P E D E L D T L C G A E V D V G S N D M - - I S E T S P -
Sb033225_Sorbi1    Q A S H I M E Q G C G T P M D T A T V A - - - - - - - - - - - - - - - - - - - - - - - T D S S A N D A F P V Q H F S P R
 
AT5G02840.1     - - - - - - - - S A S G I G S S S R T L S D S K G L R L A K Q A P S M H G L P D F A E V Y N F I G S V F D P D S K G R M
Sb033225_Sorbi1    H T Q G A T Y N N S S S I G S Q S G T W P T S E G T E Q D I R H P A L S A M P D F A R V Y N F L G S I F D P E T N G H L
 
AT5G02840.1     K K L K E M D P I N F E T V L L L M R N L T V N L S N P D F E P T S E Y V D A - - - - - - A E E G H E H L S S - - - - -
Sb033225_Sorbi1    Q Q L K E M D P I D A E T V L L L M K N L S I N L T S P N F E E H R R L L S S H A S S M D Q E M G S S H I H L P F M I T
 
AT5G02840.1     - -
Sb033225_Sorbi1    S K
 
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