fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G02840.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb027895 not found in 294aa AT5G52660.1 1st_not 0.433189655 II
Sb033225 SNAPNHLRLGLLDMLV in 376/488 AT5G52660.2 not_not 0.413793103 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G02840.1     ------------MTSTNPVVAEVIPAETSTDATETTIATTEAG-----------------
Sb027895_Sorbi1 --------DPSPLTFLSMVSASAPPPPLQSD-------AAGSG-----------------
Sb033225_Sorbi1 GLRYATRKEEQEGSGRSMVSMSTTPHPLDPSVP----AVAGGGKEEEEEAGRAREEAAAA
                             :  . *  .. *   ...       .: .*                 

AT5G02840.1     -----------------EAPEKKVRKAYTITKSRESWTEGEHDKFLEALQLFDRDWKKIE
Sb027895_Sorbi1 -----------------EDASKKVRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIE
Sb033225_Sorbi1 AAAPAAVPVPTVGNDDDDDGPRRVRKPYTITKSRESWTDPEHDKFLEALQLFDRDWKKIE
                                 :   ::***.***********: ********************

AT5G02840.1     DFVGSKTVIQIRSHAQKYFLKVQKNGTLAHVPPPRPKRKAAHPYPQKASKNAQMSLHVSM
Sb027895_Sorbi1 AFVGSKTVIQIRSHAQKYFLKVQKNGTSEHVPPPRPKRKAAHPYPQKASKNE-----PNY
Sb033225_Sorbi1 AYVGSKTVIQIRSHAQKYFLKVQKNGTGEHLPPPRPKRKAAHPYPHKASKKA-----LQV
                 :*************************  *:**************:****:       . 

AT5G02840.1     SFPTQINNLPGY---TPWDDDTSALLNIA-------VSGVIPPEDELDTLCGAEVDVGSN
Sb027895_Sorbi1 GLKTDSSSIHRN------SGMNVSVSSWAHSSIPQAVASTMVKEDL-----GAGTP-GPN
Sb033225_Sorbi1 VLPQQASHIMEQGCGTPMDTATVATDSSANDAFP--VQHFSPRHTQ-----GATY----N
                 :  : . :         .  . :  . *       *      .       **      *

AT5G02840.1     DMISETSPSASGIGSSSRTLSDSKGLRLAKQAPSMHGLPDFAEVYNFIGSVFDPDSKGRM
Sb027895_Sorbi1 NF------CSSSTEGPPRTWQPGETNDQINQVPSLRLMPDFAEVYSFLGSVFDPSTSGHL
Sb033225_Sorbi1 N--------SSSIGSQSGTWPTSEGTEQDIRHPALSAMPDFARVYNFLGSIFDPETNGHL
                :        :*.  . . *   .:      : *::  :****.**.*:**:***.:.*::

AT5G02840.1     KKLKEMDPINFETVLLLMRNLTVNLSNPDFEPTSEYVDA------AEEGHEH-----LSS
Sb027895_Sorbi1 QKLKEMNPIDVETALLLMRNLSINLTSPDFEDQRKLLSSYSTSDGLQLGSSRSSALAMST
Sb033225_Sorbi1 QQLKEMDPIDAETVLLLMKNLSINLTSPNFEEHRRLLSSHASSMDQEMGSSH-----IHL
                ::****:**: **.****:**::**:.*:**   . :.:       : * .:     :  

AT5G02840.1     -------
Sb027895_Sorbi1 PFM----
Sb033225_Sorbi1 PFMITSK
BoxShade v3.31 C (beta, 970507) Output
AT5G02840.1     - - - - - - - - - - - - M T S T N P V V A E V I P A E T S T D A T E T T I A T T E A G - - - - - - - - - - - - - - - - -
Sb027895_Sorbi1    - - - - - - - - D P S P L T F L S M V S A S A P P P P L Q S D - - - - - - - A A G S G - - - - - - - - - - - - - - - - -
Sb033225_Sorbi1    G L R Y A T R K E E Q E G S G R S M V S M S T T P H P L D P S V P - - - - A V A G G G K E E E E E A G R A R E E A A A A
 
AT5G02840.1     - - - - - - - - - - - - - - - - - E A P E K K V R K A Y T I T K S R E S W T E G E H D K F L E A L Q L F D R D W K K I E
Sb027895_Sorbi1    - - - - - - - - - - - - - - - - - E D A S K K V R K P Y T I T K S R E S W T E Q E H D K F L E A L Q L F D R D W K K I E
Sb033225_Sorbi1    A A A P A A V P V P T V G N D D D D D G P R R V R K P Y T I T K S R E S W T D P E H D K F L E A L Q L F D R D W K K I E
 
AT5G02840.1     D F V G S K T V I Q I R S H A Q K Y F L K V Q K N G T L A H V P P P R P K R K A A H P Y P Q K A S K N A Q M S L H V S M
Sb027895_Sorbi1    A F V G S K T V I Q I R S H A Q K Y F L K V Q K N G T S E H V P P P R P K R K A A H P Y P Q K A S K N E - - - - - P N Y
Sb033225_Sorbi1    A Y V G S K T V I Q I R S H A Q K Y F L K V Q K N G T G E H L P P P R P K R K A A H P Y P H K A S K K A - - - - - L Q V
 
AT5G02840.1     S F P T Q I N N L P G Y - - - T P W D D D T S A L L N I A - - - - - - - V S G V I P P E D E L D T L C G A E V D V G S N
Sb027895_Sorbi1    G L K T D S S S I H R N - - - - - - S G M N V S V S S W A H S S I P Q A V A S T M V K E D L - - - - - G A G T P - G P N
Sb033225_Sorbi1    V L P Q Q A S H I M E Q G C G T P M D T A T V A T D S S A N D A F P - - V Q H F S P R H T Q - - - - - G A T Y - - - - N
 
AT5G02840.1     D M I S E T S P S A S G I G S S S R T L S D S K G L R L A K Q A P S M H G L P D F A E V Y N F I G S V F D P D S K G R M
Sb027895_Sorbi1    N F - - - - - - C S S S T E G P P R T W Q P G E T N D Q I N Q V P S L R L M P D F A E V Y S F L G S V F D P S T S G H L
Sb033225_Sorbi1    N - - - - - - - - S S S I G S Q S G T W P T S E G T E Q D I R H P A L S A M P D F A R V Y N F L G S I F D P E T N G H L
 
AT5G02840.1     K K L K E M D P I N F E T V L L L M R N L T V N L S N P D F E P T S E Y V D A - - - - - - A E E G H E H - - - - - L S S
Sb027895_Sorbi1    Q K L K E M N P I D V E T A L L L M R N L S I N L T S P D F E D Q R K L L S S Y S T S D G L Q L G S S R S S A L A M S T
Sb033225_Sorbi1    Q Q L K E M D P I D A E T V L L L M K N L S I N L T S P N F E E H R R L L S S H A S S M D Q E M G S S H - - - - - I H L
 
AT5G02840.1     - - - - - - -
Sb027895_Sorbi1    P F M - - - -
Sb033225_Sorbi1    P F M I T S K
 
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