fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G02840.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm026826 not found in 266aa AT3G09600.1 1st_not 0.584051724 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G02840.1     MTSTNPVVAEVIPAETSTDATETTIATTEAGEAPE----KKVRKAYTITKSRESWTEGEH
gm026826_Glyma1 MNST----------------TNTSNSQSMAAAAPSDGSGKKVRKPYTITKSRESWTEEEH
                *.**                *:*: : : *. **.    *****.************ **

AT5G02840.1     DKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTLAHVPPPRPKRKAAH
gm026826_Glyma1 DKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTVAHVPPPRPKRKAAH
                *********************************************:**************

AT5G02840.1     PYPQKASKNAQMSLHVSMSFPTQINNL-PGYTPWDDDTSALLNIAVSGVIPPEDELDTL-
gm026826_Glyma1 PYPQKASKNVLVPLPASIGYASSRNTLAPGFASW-DETSLLMNAGADKPMTCQDELNNLH
                *********. :.* .*:.:.:. *.* **::.* *:** *:* ...  :. :***:.* 

AT5G02840.1     CGAEVDVGSNDMISETSPSASGIGSSSRTLSDSKGLRLAKQAPSMHGLPDFAEVYNFIGS
gm026826_Glyma1 HGNEADIGSKGIAQITNSSLSGVGNSTGALPTSEIPKQGKQAPVLHGLPDFAEVYSFIGS
                 * *.*:**:.: . *..* **:*.*: :*. *:  : .**** :**********.****

AT5G02840.1     VFDPDSKGRMKKLKEMDPINFETVLLLMRNLTVNLSNPDFEPTSEYVDAAEEGHEHLSS
gm026826_Glyma1 VFDPETNDHVQKLKEMDPINFETVLLLMRNLTVNLSSPDFEPI----------------
                ****:::.:::*************************.*****
BoxShade v3.31 C (beta, 970507) Output
AT5G02840.1     M T S T N P V V A E V I P A E T S T D A T E T T I A T T E A G E A P E - - - - K K V R K A Y T I T K S R E S W T E G E H
gm026826_Glyma1    M N S T - - - - - - - - - - - - - - - - T N T S N S Q S M A A A A P S D G S G K K V R K P Y T I T K S R E S W T E E E H
 
AT5G02840.1     D K F L E A L Q L F D R D W K K I E D F V G S K T V I Q I R S H A Q K Y F L K V Q K N G T L A H V P P P R P K R K A A H
gm026826_Glyma1    D K F L E A L Q L F D R D W K K I E D F V G S K T V I Q I R S H A Q K Y F L K V Q K N G T V A H V P P P R P K R K A A H
 
AT5G02840.1     P Y P Q K A S K N A Q M S L H V S M S F P T Q I N N L - P G Y T P W D D D T S A L L N I A V S G V I P P E D E L D T L -
gm026826_Glyma1    P Y P Q K A S K N V L V P L P A S I G Y A S S R N T L A P G F A S W - D E T S L L M N A G A D K P M T C Q D E L N N L H
 
AT5G02840.1     C G A E V D V G S N D M I S E T S P S A S G I G S S S R T L S D S K G L R L A K Q A P S M H G L P D F A E V Y N F I G S
gm026826_Glyma1    H G N E A D I G S K G I A Q I T N S S L S G V G N S T G A L P T S E I P K Q G K Q A P V L H G L P D F A E V Y S F I G S
 
AT5G02840.1     V F D P D S K G R M K K L K E M D P I N F E T V L L L M R N L T V N L S N P D F E P T S E Y V D A A E E G H E H L S S
gm026826_Glyma1    V F D P E T N D H V Q K L K E M D P I N F E T V L L L M R N L T V N L S S P D F E P I - - - - - - - - - - - - - - - -
 
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